RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 PIKFYVEQ9Y2I7 2098 aa17.17■□□□□ 0.34
SMN2-213ENST00000614240 A0A1B0GX78 115 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 HEATR9A2RTY3 570 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 WIPF3A6NGB9 483 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 PEBP1P30086 187 aaKnown RBP17.16■□□□□ 0.34
SMN2-213ENST00000614240 PKLRP30613 574 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 PPARGP37231 505 aaPredicted RBP17.16■□□□□ 0.34
SMN2-213ENST00000614240 GDF10P55107 478 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 SOX8P57073 446 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 PRAMEF13Q5VWM6 474 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 AFTPHQ6ULP2 937 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 PPP1R21Q6ZMI0 780 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 Q6ZS92 163 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 PEX26Q7Z412 305 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 CUZD1Q86UP6 607 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 TAX1BP1Q86VP1 789 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 OR6P1Q8NGX9 317 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 SLC22A18Q96BI1 424 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 RANBP9Q96S59 729 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 WDR77Q9BQA1 342 aaPredicted RBP17.16■□□□□ 0.34
SMN2-213ENST00000614240 ZBTB20Q9HC78 741 aaPredicted RBP17.16■□□□□ 0.34
SMN2-213ENST00000614240 CIDEBQ9UHD4 219 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 PCDHGA10Q9Y5H3 936 aa17.16■□□□□ 0.34
SMN2-213ENST00000614240 BTNL10A8MVZ5 291 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 ALOX12BO75342 701 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 GOT2P00505 430 aaKnown RBP17.15■□□□□ 0.34
SMN2-213ENST00000614240 APOA4P06727 396 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 MMP11P24347 488 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 DCTP40126 519 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 CDH17Q12864 832 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 HIF1AQ16665 826 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 ZC3H12BQ5HYM0 836 aaKnown RBP17.15■□□□□ 0.34
SMN2-213ENST00000614240 AGAP7PQ5VUJ5 663 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 OVCH1Q7RTY7 1134 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 TMEM151BQ8IW70 566 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 SLC22A15Q8IZD6 547 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 DNAJB14Q8TBM8 379 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 INPP5DQ92835 1189 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 FKBP10Q96AY3 582 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 NACC2Q96BF6 587 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 VPS50Q96JG6 964 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 AGAP4Q96P64 663 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 PANX2Q96RD6 677 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 SLC6A20Q9NP91 592 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 SLC22A11Q9NSA0 550 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 SLC39A10Q9ULF5 831 aa17.15■□□□□ 0.34
SMN2-213ENST00000614240 R3HDM2Q9Y2K5 976 aaKnown RBP17.15■□□□□ 0.34
SMN2-213ENST00000614240 GRID2IPA4D2P6 1211 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 ENO4A6NNW6 628 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 E7EVH7 732 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 CD9P21926 228 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 PSMA3P25788 255 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 CCR7P32248 378 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 GRIA3P42263 894 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 PRAMEP78395 509 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 GRM7Q14831 915 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 TMED2Q15363 201 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 SF1Q15637 639 aaKnown RBP17.14■□□□□ 0.33
SMN2-213ENST00000614240 RBBP7Q16576 425 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 FASTKD1Q53R41 847 aaKnown RBP17.14■□□□□ 0.33
SMN2-213ENST00000614240 CRB2Q5IJ48 1285 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 TTC23LQ6PF05 361 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 DCUN1D3Q8IWE4 304 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 PARP9Q8IXQ6 854 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 LRRC57Q8N9N7 239 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 LMNTD1Q8N9Z9 388 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 TTC29Q8NA56 475 aaPredicted RBP17.14■□□□□ 0.33
SMN2-213ENST00000614240 OR13J1Q8NGT2 312 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 OR4L1Q8NH43 312 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 GSDMBQ8TAX9 411 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 ASZ1Q8WWH4 475 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 CNDP1Q96KN2 507 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 IL17FQ96PD4 163 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 WDR54Q9H977 334 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 CUTCQ9NTM9 273 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 SLC2A6Q9UGQ3 507 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 ANAPC5Q9UJX4 755 aa17.14■□□□□ 0.33
SMN2-213ENST00000614240 PACSIN2Q9UNF0 486 aaPredicted RBP17.14■□□□□ 0.33
SMN2-213ENST00000614240 ERI2A8K979 691 aaKnown RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 MIF4GDA9UHW6 222 aaKnown RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 DSCR3O14972 297 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 S1PR4O95977 384 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 ALBP02768 609 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 NKG7Q16617 165 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 TCTE1Q5JU00 501 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 TSTD2Q5T7W7 516 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 YOD1Q5VVQ6 348 aaPredicted RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 FIGLAQ6QHK4 219 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 SHISA6Q6ZSJ9 500 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 SYCE1Q8N0S2 351 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 LINC01555Q8NAE3 123 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 ST6GALNAC3Q8NDV1 305 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 SLC35B2Q8TB61 432 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 PPP4R1Q8TF05 950 aa17.13■□□□□ 0.33
SMN2-213ENST00000614240 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.13■□□□□ 0.33
SMN2-213ENST00000614240 SELENOSQ9BQE4 189 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms