RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ART5Q96L15 291 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 POLR2J3Q9H1A7 115 aaKnown RBP17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ZDHHC3Q9NYG2 299 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 PCDHGC4Q9Y5F7 938 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 DAPL1A0PJW8 107 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SNX4O95219 450 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 RASGRP1O95267 797 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 NPPAP01160 153 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 DGKGP49619 791 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SCARB2Q14108 478 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 OR2AJ1Q8NGZ0 328 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 OR14C36Q8NHC7 312 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ZFAND2BQ8WV99 257 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 THRSPQ92748 146 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 PSMG2Q969U7 264 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 IFT27Q9BW83 186 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 C1orf21Q9H246 121 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 SIX2Q9NPC8 291 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 ELOVL2Q9NXB9 296 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 FBXW2Q9UKT8 454 aa17.07■□□□□ 0.32
HMGXB3-206ENST00000613459 TREHO43280 583 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 YES1P07947 543 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 ACVR2AP27037 513 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 CBLBQ13191 982 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 HIST1H2AAQ96QV6 131 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 SLC6A15Q9H2J7 730 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 HCN3Q9P1Z3 774 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 ZNF639Q9UID6 485 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 TBX1O43435 398 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 PCDH7O60245 1069 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 IL7RP16871 459 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 CCR8P51685 355 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 CARD16Q5EG05 197 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 OR10G2Q8NGC3 310 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 TRPM4Q8TD43 1214 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 MYOCQ99972 504 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 SRMSQ9H3Y6 488 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 APOBEC3GQ9HC16 384 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 A0A1W2PRB8 838 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 CCL16O15467 120 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 ECHS1P30084 290 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 SNIP1Q8TAD8 396 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 ERLEC1Q96DZ1 483 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 MAPKAP1Q9BPZ7 522 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 C12orf65Q9H3J6 166 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 MRPS30Q9NP92 439 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 P2RX2Q9UBL9 471 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 ILVBLA1L0T0 632 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 ACOX3O15254 700 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 HOXC12P31275 282 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 TUBA1BP68363 451 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 TMEM214Q6NUQ4 689 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 TUBA1AQ71U36 451 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 TMEM17Q86X19 198 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 OR10H4Q8NGA5 316 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 AIFM2Q9BRQ8 373 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 DPEP3Q9H4B8 488 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 PCDHGB5Q9Y5G0 923 aa17.06■□□□□ 0.32
HMGXB3-206ENST00000613459 IGKV6D-41A0A0C4DH26 115 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 NOBOXO60393 691 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 SLC2A2P11168 524 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CD36P16671 472 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 ACSBG2Q5FVE4 666 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 KCTD7Q96MP8 289 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 EBPLQ9BY08 206 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 TAS2R1Q9NYW7 299 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 FCF1Q9Y324 198 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CPQQ9Y646 472 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 FFAR2O15552 330 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 MT-ND1P03886 318 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 TUBA3EQ6PEY2 450 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 PYROXD2Q8N2H3 581 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 PIWIL1Q96J94 861 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 PREBQ9HCU5 417 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 C3P01024 1663 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 RHPN2P1A8MT19 583 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 MT-CYBP00156 380 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CLCN7P51798 805 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 TSPAN5P62079 268 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 ZMYND11Q15326 602 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 MSANTD1Q6ZTZ1 278 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 ZC3H10Q96K80 434 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CYP2S1Q96SQ9 504 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 ZDHHC18Q9NUE0 388 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 FLRT1Q9NZU1 646 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 SPEF1Q9Y4P9 236 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 FAM159BA6NKW6 160 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 PRH1P02810 166 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 ALPPL2P10696 532 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 WSCD2Q2TBF2 565 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 TMEM126BQ8IUX1 230 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CLIP4Q8N3C7 705 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 RIPOR3Q96MK2 946 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 SPATA9Q9BWV2 254 aa17.05■□□□□ 0.32
HMGXB3-206ENST00000613459 OR2AT4A6NND4 320 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms