RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 TBC1D29Q9UFV1 150 aa14.35□□□□□ -0.11
CIT-219ENST00000612548 BTRCQ9Y297 605 aa14.35□□□□□ -0.11
CIT-219ENST00000612548 DNAJC15Q9Y5T4 150 aa14.35□□□□□ -0.11
CIT-219ENST00000612548 DGKBQ9Y6T7 804 aa14.35□□□□□ -0.11
CIT-219ENST00000612548 THADAQ6YHU6 1953 aa14.35□□□□□ -0.11
CIT-219ENST00000612548 KNL1Q8NG31 2342 aa14.35□□□□□ -0.11
CIT-219ENST00000612548 SDHDO14521 159 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 RACK1P63244 317 aaKnown RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 GRB7Q14451 532 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 UAP1L1Q3KQV9 507 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 UGT3A2Q3SY77 523 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TCHHL1Q5QJ38 904 aaPredicted RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 MILR1Q7Z6M3 343 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 THOC6Q86W42 341 aaKnown RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 RGL4Q8IZJ4 473 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 OR56A3Q8NH54 315 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 C19orf60Q96EN9 201 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 NMUR2Q9GZQ4 415 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 MEAF6Q9HAF1 191 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TM9SF3Q9HD45 589 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TCF7L2Q9NQB0 619 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 INTS7Q9NVH2 962 aaKnown RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 TRNAU1APQ9NX07 287 aaKnown RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 SCHIP1Q9P0W5 487 aaPredicted RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 KLF15Q9UIH9 416 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 ZFP69BQ9UJL9 534 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 PTGDR2Q9Y5Y4 395 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TDRD6O60522 2096 aaKnown RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 SPAG17Q6Q759 2223 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 A0A1W2PR77 199 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 E9PBE3 544 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 FCHO1O14526 889 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 PIP5K1BO14986 540 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 KLHL41O60662 606 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 EML2O95834 649 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 CAPN1P07384 714 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 UROSP10746 265 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TDGF1P13385 188 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 HOXA6P31267 233 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 HALP42357 657 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 PNLIPRP1P54315 467 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 INHBCP55103 352 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TBPL1P62380 186 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 ILF3Q12906 894 aaKnown RBP eCLIP14.34□□□□□ -0.114e-6■■■■□ 22.3
CIT-219ENST00000612548 CDC16Q13042 620 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 FASTKQ14296 549 aaKnown RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 RPE65Q16518 533 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 NXNQ6DKJ4 435 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 ACAD11Q709F0 780 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 PARGQ86W56 976 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
CIT-219ENST00000612548 DDIASQ8IXT1 998 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 TBC1D21Q8IYX1 336 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 MFSD2AQ8NA29 543 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 CCT6BQ92526 530 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 NRTNQ99748 197 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 NTMT1Q9BV86 223 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 RNF11Q9Y3C5 154 aa14.34□□□□□ -0.11
CIT-219ENST00000612548 SDK1Q7Z5N4 2213 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 CCDC163A0A0D9SF12 145 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 EBLN1P0CF75 366 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 HGFP14210 728 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 KRT33BQ14525 404 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 LSM12Q3MHD2 195 aaKnown RBP14.33□□□□□ -0.12
CIT-219ENST00000612548 SUSD1Q6UWL2 747 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 CCDC121Q6ZUS5 278 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 NRROSQ86YC3 692 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 KLHDC8AQ8IYD2 350 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 PHACTR4Q8IZ21 702 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 C2orf73Q8N5S3 287 aaPredicted RBP14.33□□□□□ -0.12
CIT-219ENST00000612548 METTL6Q8TCB7 284 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 OR4K3Q96R72 315 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 NUSAP1Q9BXS6 441 aaKnown RBP14.33□□□□□ -0.12
CIT-219ENST00000612548 DUSP15Q9H1R2 295 aaPredicted RBP14.33□□□□□ -0.12
CIT-219ENST00000612548 TUBB1Q9H4B7 451 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 ACTR8Q9H981 624 aa14.33□□□□□ -0.12
CIT-219ENST00000612548 ARHGEF17Q96PE2 2063 aaPredicted RBP14.33□□□□□ -0.12
CIT-219ENST00000612548 PRAMEF33A0A0G2JMD5 474 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 E7ENX8 843 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 UBOX5O94941 541 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 CHEK2O96017 543 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 ENO1P06733 434 aaKnown RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 CELA2BP08218 269 aaPredicted RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 MTHFD1P11586 935 aaKnown RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 HMOX2P30519 316 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 HTR6P50406 440 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 TAP2Q03519 686 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 CSTF1Q05048 431 aaKnown RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 SRSF5Q13243 272 aaKnown RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 CAPN13Q6MZZ7 669 aaPredicted RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 SCIMPQ6UWF3 145 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 EFL1Q7Z2Z2 1120 aaKnown RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 CLNKQ7Z7G1 428 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 IQCHQ86VS3 1027 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 WDR5BQ86VZ2 330 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 DCP2Q8IU60 420 aaKnown RBP14.32□□□□□ -0.12
CIT-219ENST00000612548 C1orf210Q8IVY1 113 aa14.32□□□□□ -0.12
CIT-219ENST00000612548 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.32□□□□□ -0.12
CIT-219ENST00000612548 LRRC56Q8IYG6 542 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms