RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 LRRC70Q7Z2Q7 622 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 TRIM48Q8IWZ4 208 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 SNX31Q8N9S9 440 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 LMNTD1Q8N9Z9 388 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 PIWIL2Q8TC59 973 aaKnown RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 ZNF473Q8WTR7 871 aaKnown RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 GRAMD1AQ96CP6 724 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 NRTNQ99748 197 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 TRIM55Q9BYV6 548 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 IPPKQ9H8X2 491 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 MID1IP1Q9NPA3 183 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 ZNF624Q9P2J8 865 aaPredicted RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 SLC22A14Q9Y267 594 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 GIPC1O14908 333 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 CFIP05156 583 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 EPB42P16452 691 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 CTSKP43235 329 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 PNLIPRP1P54315 467 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 SH3BP2P78314 561 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 GALNT1Q10472 559 aaPredicted RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 IYDQ6PHW0 289 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 GKN2Q86XP6 184 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 C2orf73Q8N5S3 287 aaPredicted RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 ZNF548Q8NEK5 533 aaPredicted RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 PATE1Q8WXA2 126 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 FIS1Q9Y3D6 152 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 B4DGG1 531 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 AQP9O43315 295 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 SLC19A1P41440 591 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 RPL14P50914 215 aaKnown RBP17.02■□□□□ 0.32
SREK1-216ENST00000612404 SPATA21Q7Z572 469 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 RAB42Q8N4Z0 105 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 DCBLD1Q8N8Z6 715 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 ZDHHC1Q8WTX9 485 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 TNFRSF12AQ9NP84 129 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 DNAJC11Q9NVH1 559 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 INTS7Q9NVH2 962 aaKnown RBP17.02■□□□□ 0.32
SREK1-216ENST00000612404 DCTN4Q9UJW0 460 aa17.02■□□□□ 0.32
SREK1-216ENST00000612404 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.02■□□□□ 0.32
SREK1-216ENST00000612404 PRR33A8MZF0 331 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 RRP9O43818 475 aaKnown RBP17.02■□□□□ 0.31
SREK1-216ENST00000612404 TGDSO95455 350 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 NDUFS1P28331 727 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 PIK3CGP48736 1102 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 CCNG1P51959 295 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 TBPL1P62380 186 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 BNC1Q01954 994 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 FASTKQ14296 549 aaKnown RBP17.02■□□□□ 0.31
SREK1-216ENST00000612404 SUSD1Q6UWL2 747 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 THOC6Q86W42 341 aaKnown RBP17.02■□□□□ 0.31
SREK1-216ENST00000612404 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.31
SREK1-216ENST00000612404 SFTPA2Q8IWL1 248 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 OR52B6Q8NGF0 335 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 OR52E1Q8NGJ3 308 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 OR56A3Q8NH54 315 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 AGAP11Q8TF27 550 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 CDK15Q96Q40 435 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 ERVMER34-1Q9H9K5 563 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 FSCN3Q9NQT6 498 aa17.02■□□□□ 0.31
SREK1-216ENST00000612404 A0A1B0GTL3 188 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 TMEM233B4DJY2 109 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 YY2O15391 372 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 KATNA1O75449 491 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 CRCPO75575 148 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 SLC2A4P14672 509 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 PRDX3P30048 256 aaKnown RBP17.01■□□□□ 0.31
SREK1-216ENST00000612404 THEMIS2Q5TEJ8 643 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 GKAP1Q5VSY0 366 aaPredicted RBP17.01■□□□□ 0.31
SREK1-216ENST00000612404 CAPN13Q6MZZ7 669 aaPredicted RBP17.01■□□□□ 0.31
SREK1-216ENST00000612404 GPRIN3Q6ZVF9 776 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 NAGSQ8N159 534 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 RFWD2Q8NHY2 731 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 COL25A1Q9BXS0 654 aaPredicted RBP17.01■□□□□ 0.31
SREK1-216ENST00000612404 XKR8Q9H6D3 395 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 UCKL1Q9NWZ5 548 aa17.01■□□□□ 0.31
SREK1-216ENST00000612404 OR5K4A6NMS3 321 aa17■□□□□ 0.31
SREK1-216ENST00000612404 E7ENX8 843 aa17■□□□□ 0.31
SREK1-216ENST00000612404 OR7A17O14581 309 aa17■□□□□ 0.31
SREK1-216ENST00000612404 KDM1AO60341 852 aa17■□□□□ 0.31
SREK1-216ENST00000612404 SNX3O60493 162 aa17■□□□□ 0.31
SREK1-216ENST00000612404 PIAS2O75928 621 aa17■□□□□ 0.31
SREK1-216ENST00000612404 OTCP00480 354 aa17■□□□□ 0.31
SREK1-216ENST00000612404 VIPP01282 170 aa17■□□□□ 0.31
SREK1-216ENST00000612404 HSD17B2P37059 387 aa17■□□□□ 0.31
SREK1-216ENST00000612404 ARRB1P49407 418 aaPredicted RBP17■□□□□ 0.31
SREK1-216ENST00000612404 TAP2Q03519 686 aa17■□□□□ 0.31
SREK1-216ENST00000612404 ARHGAP19Q14CB8 494 aa17■□□□□ 0.31
SREK1-216ENST00000612404 DUOXA1Q1HG43 343 aa17■□□□□ 0.31
SREK1-216ENST00000612404 PEAR1Q5VY43 1037 aaPredicted RBP17■□□□□ 0.31
SREK1-216ENST00000612404 CLEC6AQ6EIG7 209 aa17■□□□□ 0.31
SREK1-216ENST00000612404 SYVN1Q86TM6 617 aa17■□□□□ 0.31
SREK1-216ENST00000612404 SLC37A2Q8TED4 501 aa17■□□□□ 0.31
SREK1-216ENST00000612404 JPH3Q8WXH2 748 aaPredicted RBP17■□□□□ 0.31
SREK1-216ENST00000612404 ZNF382Q96SR6 550 aa17■□□□□ 0.31
SREK1-216ENST00000612404 ELF4Q99607 663 aaPredicted RBP17■□□□□ 0.31
SREK1-216ENST00000612404 CCDC177Q9NQR7 707 aaPredicted RBP17■□□□□ 0.31
SREK1-216ENST00000612404 SPATA7Q9P0W8 599 aa17■□□□□ 0.31
SREK1-216ENST00000612404 CPNE7Q9UBL6 633 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms