RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 DCAF13Q9NV06 445 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 SPG21Q9NZD8 308 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 DENND4CQ5VZ89 1909 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 PLXNB3Q9ULL4 1909 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 FAM220BPB1ANY3 271 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 PFDN1O60925 122 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 SERPINA1P01009 418 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 GSNP06396 782 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 LHCGRP22888 699 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 RANBP1P43487 201 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 ENTPD1P49961 510 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 SLC7A9P82251 487 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 PTSQ03393 145 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 TLE2Q04725 743 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 PPP1R8Q12972 351 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 CDKL4Q5MAI5 379 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 RBM48Q5RL73 367 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 DET1Q7L5Y6 550 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 GPR149Q86SP6 731 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 ANKRD46Q86W74 232 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 CROCCP3Q8IVE0 287 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 EID3Q8N140 333 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 OR52E4Q8NGH9 312 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 ITCHQ96J02 903 aa16.8■□□□□ 0.28
NEK3-206ENST00000611833 RC3H2Q9HBD1 1191 aaKnown RBP16.8■□□□□ 0.28
NEK3-206ENST00000611833 A0A096LPI6 279 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TRBV5-3A0A0A0MS03 114 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 A0A1W2PPW3 197 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 C16orf96A6NNT2 1141 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TMX2-CTNND1H3BSU7 103 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 CPNE6O95741 557 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 RETP07949 1114 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 PRPS2P11908 318 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 CA8P35219 290 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 PHC1P78364 1004 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 DEFB103AP81534 67 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 VAC14Q08AM6 782 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TMED1Q13445 227 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TRIM60Q495X7 471 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TTC23LQ6PF05 361 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 SLC39A5Q6ZMH5 540 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 LRRC70Q7Z2Q7 622 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TMC8Q8IU68 726 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 CMTM8Q8IZV2 173 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 NETO1Q8TDF5 533 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 ECHDC3Q96DC8 303 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 NRBF2Q96F24 287 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 INPP5KQ9BT40 448 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 SMG9Q9H0W8 520 aaKnown RBP16.79■□□□□ 0.28
NEK3-206ENST00000611833 SUV39H2Q9H5I1 410 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 PAK6Q9NQU5 681 aaPredicted RBP16.79■□□□□ 0.28
NEK3-206ENST00000611833 KLHL42Q9P2K6 505 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 MBD1Q9UIS9 605 aaPredicted RBP16.79■□□□□ 0.28
NEK3-206ENST00000611833 ZNF510Q9Y2H8 683 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 HS6ST1O60243 411 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 IL7RP16871 459 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 HLA-FP30511 346 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 NRIP1P48552 1158 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 PPP2R2BQ00005 443 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 MYBPC3Q14896 1274 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 ZXDCQ2QGD7 858 aaPredicted RBP16.79■□□□□ 0.28
NEK3-206ENST00000611833 SLC44A4Q53GD3 710 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 R3HCC1LQ7Z5L2 792 aaKnown RBP16.79■□□□□ 0.28
NEK3-206ENST00000611833 FAM9CQ8IZT9 166 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 TCAIMQ8N3R3 496 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 PYCR2Q96C36 320 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 MBOAT4Q96T53 435 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 CPPED1Q9BRF8 314 aaPredicted RBP16.79■□□□□ 0.28
NEK3-206ENST00000611833 SLC12A9Q9BXP2 914 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 LTB4R2Q9NPC1 389 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 USE1Q9NZ43 259 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 PCDHGA8Q9Y5G5 932 aa16.79■□□□□ 0.28
NEK3-206ENST00000611833 A0A1W2PRU2 124 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 ABCB7O75027 752 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 FKTNO75072 461 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 LRATO95237 230 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 C8GP07360 202 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 MYCLP1P12525 358 aaPredicted RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 CRHBPP24387 322 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 MAPK1P28482 360 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 CBX2Q14781 532 aaPredicted RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 C16orf72Q14CZ0 275 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 FGD3Q5JSP0 725 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 LRIF1Q5T3J3 769 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 OR13F1Q8NGS4 319 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 OR5K1Q8NHB7 308 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 CNDP2Q96KP4 475 aaKnown RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 LMLNQ96KR4 655 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 BEGAINQ9BUH8 593 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 AMBRA1Q9C0C7 1298 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 ZDHHC6Q9H6R6 413 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 MAGIXQ9H6Y5 334 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 SERHLQ9NQF3 203 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 TMEM9Q9P0T7 183 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 PER2O15055 1255 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 TGM5O43548 720 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 FOXD2O60548 495 aaPredicted RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 RECQL5O94762 991 aaPredicted RBP16.78■□□□□ 0.28
NEK3-206ENST00000611833 MATN1P21941 496 aa16.78■□□□□ 0.28
NEK3-206ENST00000611833 PRKACGP22612 351 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms