RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 MOCOSQ96EN8 888 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 CAMK1GQ96NX5 476 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 NSUN5Q96P11 429 aaKnown RBP16.02■□□□□ 0.16
PMF1-206ENST00000606952 CCT8L2Q96SF2 557 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 ELF4Q99607 663 aaPredicted RBP16.02■□□□□ 0.16
PMF1-206ENST00000606952 SIKE1Q9BRV8 207 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 NTMT1Q9BV86 223 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 ILKAPQ9H0C8 392 aaPredicted RBP16.02■□□□□ 0.16
PMF1-206ENST00000606952 IMP3Q9NV31 184 aaKnown RBP16.02■□□□□ 0.16
PMF1-206ENST00000606952 PCDHGA5Q9Y5G8 931 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 SNX11Q9Y5W9 270 aa16.02■□□□□ 0.16
PMF1-206ENST00000606952 OR52A4PA6NMU1 304 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 YKT6O15498 198 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 DFNA5O60443 496 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 EPORP19235 508 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 CCR10P46092 362 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 RAB28P51157 221 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 TRAF3Q13114 568 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 SHBQ15464 509 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 SLC23A3Q6PIS1 610 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 OGFOD3Q6PK18 319 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 KANSL1Q7Z3B3 1105 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 PIGWQ7Z7B1 504 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 CUZD1Q86UP6 607 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 RBM12BQ8IXT5 1001 aaKnown RBP16.01■□□□□ 0.15
PMF1-206ENST00000606952 ZNF781Q8N8C0 355 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 ESAMQ96AP7 390 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 FERD3LQ96RJ6 166 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 CAAP1Q9H8G2 361 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 DNAJC11Q9NVH1 559 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 GPRC5BQ9NZH0 403 aa16.01■□□□□ 0.15
PMF1-206ENST00000606952 CFAP20Q9Y6A4 193 aaKnown RBP16.01■□□□□ 0.15
PMF1-206ENST00000606952 A0A1B0GTQ1 180 aa16■□□□□ 0.15
PMF1-206ENST00000606952 FAM221BA6H8Z2 402 aa16■□□□□ 0.15
PMF1-206ENST00000606952 KRT87PA6NCN2 255 aa16■□□□□ 0.15
PMF1-206ENST00000606952 KATNA1O75449 491 aa16■□□□□ 0.15
PMF1-206ENST00000606952 ESRRBO95718 433 aa16■□□□□ 0.15
PMF1-206ENST00000606952 FASLGP48023 281 aa16■□□□□ 0.15
PMF1-206ENST00000606952 CDH13P55290 713 aa16■□□□□ 0.15
PMF1-206ENST00000606952 GGTA1PQ4G0N0 100 aa16■□□□□ 0.15
PMF1-206ENST00000606952 FBXO48Q5FWF7 155 aa16■□□□□ 0.15
PMF1-206ENST00000606952 RNF165Q6ZSG1 346 aa16■□□□□ 0.15
PMF1-206ENST00000606952 OR52E1Q8NGJ3 308 aa16■□□□□ 0.15
PMF1-206ENST00000606952 OR2L8Q8NGY9 312 aa16■□□□□ 0.15
PMF1-206ENST00000606952 PIGKQ92643 395 aa16■□□□□ 0.15
PMF1-206ENST00000606952 FAR2Q96K12 515 aa16■□□□□ 0.15
PMF1-206ENST00000606952 HGH1Q9BTY7 390 aa16■□□□□ 0.15
PMF1-206ENST00000606952 UCK1Q9HA47 277 aa16■□□□□ 0.15
PMF1-206ENST00000606952 SLC40A1Q9NP59 571 aa16■□□□□ 0.15
PMF1-206ENST00000606952 ACSS2Q9NR19 701 aa16■□□□□ 0.15
PMF1-206ENST00000606952 KLHL14Q9P2G3 628 aa16■□□□□ 0.15
PMF1-206ENST00000606952 LNPEPQ9UIQ6 1025 aa16■□□□□ 0.15
PMF1-206ENST00000606952 ZNF225Q9UK10 706 aa16■□□□□ 0.15
PMF1-206ENST00000606952 SDK1Q7Z5N4 2213 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 PCM1Q15154 2024 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 A0A1W2PPV9 198 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 SLCO1B7G3V0H7 640 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 OR7A17O14581 309 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 YY2O15391 372 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 SNX3O60493 162 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 CCNT2O60583 730 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 UGDHO60701 494 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 WDR47O94967 919 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 OTCP00480 354 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 EPB42P16452 691 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 MPSTP25325 297 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 EPHA8P29322 1005 aaPredicted RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 SHMT2P34897 504 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 GDF5P43026 501 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 ARRB1P49407 418 aaPredicted RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 RPL14P50914 215 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 TBPL1P62380 186 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 SH3BP2P78314 561 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 GRIK2Q13002 908 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 CDC16Q13042 620 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 C1orf61Q13536 156 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 NAE1Q13564 534 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 TERF2Q15554 542 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 CAPN13Q6MZZ7 669 aaPredicted RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 ZC3H14Q6PJT7 736 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 IL27RAQ6UWB1 636 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 LCTLQ6UWM7 567 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 RPS27LQ71UM5 84 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 THOC6Q86W42 341 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 RAB42Q8N4Z0 105 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 TEX9Q8N6V9 391 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 LMX1AQ8TE12 382 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 SLC37A2Q8TED4 501 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 TRPC4APQ8TEL6 797 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 SETD7Q8WTS6 366 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 ZDHHC1Q8WTX9 485 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 CXorf40BQ96DE9 158 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 WDR34Q96EX3 536 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 MAGEB10Q96LZ2 347 aaPredicted RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 MIPEPQ99797 713 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 LRFN3Q9BTN0 628 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 NUSAP1Q9BXS6 441 aaKnown RBP15.99■□□□□ 0.15
PMF1-206ENST00000606952 TRIM55Q9BYV6 548 aa15.99■□□□□ 0.15
PMF1-206ENST00000606952 PCBD2Q9H0N5 130 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms