RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MCM3P25205 808 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PEBP1P30086 187 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NSG1P42857 185 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CARSP49589 748 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CSNK1G2P78368 415 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 KLC1Q07866 573 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 WASHC5Q12768 1159 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RPA4Q13156 261 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CNSTQ6PJW8 725 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RFX6Q8HWS3 928 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 DTWD1Q8N5C7 304 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ADAMTS18Q8TE60 1221 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 HAS2Q92819 552 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FSD1LQ9BXM9 530 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 VPS37BQ9H9H4 285 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 KLHL8Q9P2G9 620 aaPredicted RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 C3orf18Q9UK00 162 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ASF1AQ9Y294 204 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TDRKHQ9Y2W6 561 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MRPS2Q9Y399 296 aaKnown RBP11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MAU2Q9Y6X3 613 aa11.26□□□□□ -0.61
PDLIM1P1-201ENST00000604187 A0A087X0T9 212 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 C2orf81A6NN90 581 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 AGAP14A8MT82 685 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF487B1APH4 448 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FAM228BP0C875 321 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 COX6A1P12074 109 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 DRD2P14416 443 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZFXP17010 805 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ITGALP20701 1170 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FDXRP22570 491 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 XIAPP98170 497 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GRM7Q14831 915 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 KIR2DS3Q14952 304 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TAF1AQ15573 450 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NFKBIBQ15653 356 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TFDP3Q5H9I0 405 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 HIBCHQ6NVY1 386 aaPredicted RBP11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ARHGEF18Q6ZSZ5 1173 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CLDN19Q8N6F1 224 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SUN3Q8TAQ9 357 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ENKD1Q9H0I2 346 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GPAMQ9HCL2 828 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ANO10Q9NW15 660 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MEMO1Q9Y316 297 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PCDHGB6Q9Y5F9 930 aa11.25□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FAM227AF5H4B4 570 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CCL22O00626 93 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 WFS1O76024 890 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 BMP10O95393 424 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 AGTP01019 485 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 KRT1P04264 644 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 CELA2AP08217 269 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RAB28P51157 221 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OCA2Q04671 838 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 EEF1A2Q05639 463 aaKnown RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MPP3Q13368 585 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 STX1AQ16623 288 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 YOD1Q5VVQ6 348 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ATG9BQ674R7 924 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ALKBH5Q6P6C2 394 aaKnown RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MICALCLQ6ZW33 695 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NDUFAF7Q7L592 441 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SNX20Q7Z614 316 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TTC29Q8NA56 475 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ACBD4Q8NC06 268 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OR13C4Q8NGS5 318 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 STT3BQ8TCJ2 826 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 HEXDCQ8WVB3 486 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TFB1MQ8WVM0 346 aaKnown RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MIEF2Q96C03 454 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FCRL5Q96RD9 977 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 FICDQ9BVA6 458 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TSPAN10Q9H1Z9 355 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SAE1Q9UBE0 346 aaPredicted RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 POLG2Q9UHN1 485 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MDC1Q14676 2089 aaKnown RBP11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 MYO7BQ6PIF6 2116 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZGRF1Q86YA3 2104 aa11.24□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OR5H15A6NDH6 313 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 C5orf60A6NFR6 353 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZGLP1P0C6A0 271 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PECAM1P16284 738 aaPredicted RBP11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 GRIA3P42263 894 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SASS6Q6UVJ0 657 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 NEK10Q6ZWH5 1172 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 PID1Q7Z2X4 250 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 VSIG1Q86XK7 387 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TBC1D21Q8IYX1 336 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 ZNF567Q8N184 647 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 LMNTD1Q8N9Z9 388 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 OR5K2Q8NHB8 316 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TREX2Q9BQ50 279 aaPredicted RBP11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 SELENOSQ9BQE4 189 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 APOL2Q9BQE5 337 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 TMEM121Q9BTD3 319 aa11.23□□□□□ -0.61
PDLIM1P1-201ENST00000604187 RNF32Q9H0A6 362 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms