RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SLC6A3Q01959 620 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 FOXM1Q08050 763 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 DMWDQ09019 674 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 FGL2Q14314 439 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 UAP1Q16222 522 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ALKBH6Q3KRA9 238 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 GTDC1Q4AE62 458 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 EPC2Q52LR7 807 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 FASTKD1Q53R41 847 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 KHDC1LQ5JSQ8 128 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 PIP5KL1Q5T9C9 394 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ARHGAP40Q5TG30 622 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SCARA3Q6AZY7 606 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 OGFOD2Q6N063 350 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 C1orf94Q6P1W5 598 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 LYPD4Q6UWN0 246 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 TOM1L2Q6ZVM7 507 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 NDUFAF7Q7L592 441 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 NIPA1Q7RTP0 329 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 HEATR3Q7Z4Q2 680 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SETD3Q86TU7 594 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ASPGQ86U10 573 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 LDHDQ86WU2 507 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 RHOT1Q8IXI2 618 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 KATNAL2Q8IYT4 538 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 UNC5BQ8IZJ1 945 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 KDM8Q8N371 416 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 TBC1D19Q8N5T2 526 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 DCBLD1Q8N8Z6 715 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 NFKBIDQ8NI38 313 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CASKIN2Q8WXE0 1202 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 C5orf30Q96GV9 206 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 MSLNLQ96KJ4 702 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 MYRFLQ96LU7 910 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF558Q96NG5 402 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 PRMT1Q99873 361 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 OPN3Q9H1Y3 402 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 NOL11Q9H8H0 719 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 RPF1Q9H9Y2 349 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 RAVER2Q9HCJ3 691 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 RAB9BQ9NP90 201 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ABHD10Q9NUJ1 306 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 FGFR1OP2Q9NVK5 253 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SRRDQ9UH36 339 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 DNPEPQ9ULA0 475 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 STAP1Q9ULZ2 295 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 GMPPBQ9Y5P6 360 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SALL1Q9NSC2 1324 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ANKRD26Q9UPS8 1709 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 N4BP2Q86UW6 1770 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 C17orf102A2RUQ5 167 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM170BA6NMN3 283 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CLEC3AO75596 197 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 VNN1O95497 513 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 GHRHP01286 108 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 IL6P05231 212 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CD247P20963 164 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 DRD5P21918 477 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 PRDX6P30041 224 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 GJA4P35212 333 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 MANFP55145 182 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CDK16Q00536 496 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SPP2Q13103 211 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 PIGHQ14442 188 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 EARS2Q5JPH6 523 aaKnown RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM31Q5JXX7 168 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ARHGEF16Q5VV41 709 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 DPY19L2P1Q6NXN4 242 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CYB5R4Q7L1T6 521 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 TMPRSS7Q7RTY8 843 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CXorf67Q86X51 503 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CATSPERDQ86XM0 798 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 Q8N9G6 341 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 KBTBD3Q8NAB2 608 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 OR8J2Q8NGG1 315 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CYP2W1Q8TAV3 490 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 GPBAR1Q8TDU6 330 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 TNFRSF14Q92956 283 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 NKD2Q969F2 451 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 MCRS1Q96EZ8 462 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ASCL2Q99929 193 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SEC22CQ9BRL7 303 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF416Q9BWM5 594 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 EXO5Q9H790 373 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SAR1AQ9NR31 198 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CATSPERZQ9NTU4 200 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 PRMT7Q9NVM4 692 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 PSMC3IPQ9P2W1 217 aaPredicted RBP4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 SLCO3A1Q9UIG8 710 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF229Q9UJW7 825 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CYP8B1Q9UNU6 501 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 ADAM18Q9Y3Q7 739 aa4.91□□□□□ -1.62
SPTBN1-206ENST00000602898 CCDC187A0A096LP49 1063 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 A0A1W2PQ72 361 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 ESYT2A0FGR8 921 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 LRRC53A6NM62 1247 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM25AB3EWG3 89 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM25CB3EWG5 89 aa4.9□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM25GB3EWG6 89 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms