RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ACTR1BP42025 376 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 PNLIPRP1P54315 467 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 ACTR1AP61163 376 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 PRKG2Q13237 762 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 TUBB3Q13509 450 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 FZD2Q14332 565 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 ARHGAP19Q14CB8 494 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 PARGQ86W56 976 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 DDIASQ8IXT1 998 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 DCBLD1Q8N8Z6 715 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 CEP70Q8NHQ1 597 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 MAELQ96JY0 434 aaKnown RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 MYLK2Q9H1R3 596 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 MVB12BQ9H7P6 319 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 INTS7Q9NVH2 962 aaKnown RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 TIMM22Q9Y584 194 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 PLXND1Q9Y4D7 1925 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 SDHDO14521 159 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 CAPN1P07384 714 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 BCKDHBP21953 392 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 CCND1P24385 295 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 AK4P27144 223 aaPredicted RBP17.47■□□□□ 0.39
VRK3-225ENST00000601912 MAOBP27338 520 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 DMWDQ09019 674 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 CLCA4Q14CN2 919 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 LSM12Q3MHD2 195 aaKnown RBP17.47■□□□□ 0.39
VRK3-225ENST00000601912 TSSK4Q6SA08 328 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 ABRAXAS1Q6UWZ7 409 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 CLNKQ7Z7G1 428 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 MYLK4Q86YV6 388 aaPredicted RBP17.47■□□□□ 0.39
VRK3-225ENST00000601912 TMEFF1Q8IYR6 380 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 RGL4Q8IZJ4 473 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 OR52B2Q96RD2 323 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 GSDMCQ9BYG8 508 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 NMUR2Q9GZQ4 415 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 DUSP15Q9H1R2 295 aaPredicted RBP17.47■□□□□ 0.39
VRK3-225ENST00000601912 PRMT8Q9NR22 394 aaPredicted RBP17.47■□□□□ 0.39
VRK3-225ENST00000601912 SPATA7Q9P0W8 599 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 TBC1D29Q9UFV1 150 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 TRPS1Q9UHF7 1281 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 PCOLCE2Q9UKZ9 415 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 PNMA8BQ9ULN7 279 aaPredicted RBP17.47■□□□□ 0.39
VRK3-225ENST00000601912 ST14Q9Y5Y6 855 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 COLEC10Q9Y6Z7 277 aa17.47■□□□□ 0.39
VRK3-225ENST00000601912 ATXN2Q99700 1313 aaKnown RBP17.46■□□□□ 0.39
VRK3-225ENST00000601912 E9PBE3 544 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 PIP5K1BO14986 540 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 KDM1AO60341 852 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 KLHL41O60662 606 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 VPS4BO75351 444 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 CTSEP14091 401 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 NCF2P19878 526 aaPredicted RBP17.46■□□□□ 0.39
VRK3-225ENST00000601912 EIF2B5Q13144 721 aaKnown RBP17.46■□□□□ 0.39
VRK3-225ENST00000601912 RPE65Q16518 533 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 SPDYAQ5MJ70 313 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 WDR45BQ5MNZ6 344 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 SLC30A9Q6PML9 568 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 PPFIBP2Q8ND30 876 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 ACTRT2Q8TDY3 377 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 MIPEPQ99797 713 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 KCNE2Q9Y6J6 123 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 SLCO1B1Q9Y6L6 691 aa17.46■□□□□ 0.39
VRK3-225ENST00000601912 A0A1W2PR77 199 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TMEM221A6NGB7 291 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 E7ENX8 843 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 M0R296 226 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 CLGNO14967 610 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 UGDHO60701 494 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 UBOX5O94941 541 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 MTHFD1P11586 935 aaKnown RBP17.45■□□□□ 0.38
VRK3-225ENST00000601912 EPORP19235 508 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 NDUFS1P28331 727 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 FNTBP49356 437 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TBPL1P62380 186 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TAP2Q03519 686 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TSTA3Q13630 321 aaPredicted RBP17.45■□□□□ 0.38
VRK3-225ENST00000601912 GRB7Q14451 532 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 DUS1LQ6P1R4 473 aaKnown RBP17.45■□□□□ 0.38
VRK3-225ENST00000601912 LPCAT2Q7L5N7 544 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 WDR5BQ86VZ2 330 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 PHACTR4Q8IZ21 702 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 CCL4L1Q8NHW4 92 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 GPBAR1Q8TDU6 330 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 RAB11FIP5Q9BXF6 653 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 SLC29A3Q9BZD2 475 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TM9SF3Q9HD45 589 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 CCDC177Q9NQR7 707 aaPredicted RBP17.45■□□□□ 0.38
VRK3-225ENST00000601912 GPRC5BQ9NZH0 403 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 PLAGL1Q9UM63 463 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 RNF11Q9Y3C5 154 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 OR52A4PA6NMU1 304 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TLR4O00206 839 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 GNAZP19086 355 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 IRF8Q02556 426 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 TCEA2Q15560 299 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 GGTA1PQ4G0N0 100 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 C11orf74Q86VG3 221 aa17.45■□□□□ 0.38
VRK3-225ENST00000601912 SETD7Q8WTS6 366 aaKnown RBP17.45■□□□□ 0.38
VRK3-225ENST00000601912 DNASE2BQ8WZ79 361 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms