RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 MATN4O95460 622 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 SOD1P00441 154 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 ANXA5P08758 320 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 HOXC4P09017 264 aaPredicted RBP11.24□□□□□ -0.61
ZNF548-211ENST00000600927 PRDX6P30041 224 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 SCTRP47872 440 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 ACADVLP49748 655 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 MNAT1P51948 309 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 HNRNPKP61978 463 aaKnown RBP eCLIP11.24□□□□□ -0.61
ZNF548-211ENST00000600927 CLCQ05315 142 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 RPA4Q13156 261 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 TUBB3Q13509 450 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 GTF2H3Q13889 308 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 PTK2BQ14289 1009 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 INPP5AQ14642 412 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 NFATC4Q14934 902 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 PNCKQ6P2M8 343 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 RNF165Q6ZSG1 346 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 EID2Q8N6I1 236 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 ZNF548Q8NEK5 533 aaPredicted RBP11.24□□□□□ -0.61
ZNF548-211ENST00000600927 LKAAEAR1Q8TD35 194 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 MCOLN3Q8TDD5 553 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 THOC1Q96FV9 657 aaKnown RBP11.24□□□□□ -0.61
ZNF548-211ENST00000600927 NSL1Q96IY1 281 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 HIC2Q96JB3 615 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 MAGEB10Q96LZ2 347 aaPredicted RBP11.24□□□□□ -0.61
ZNF548-211ENST00000600927 UNKQ9C0B0 810 aaKnown RBP11.24□□□□□ -0.61
ZNF548-211ENST00000600927 MEAF6Q9HAF1 191 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 PARVBQ9HBI1 364 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 CYP4F12Q9HCS2 524 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 TCF7L2Q9NQB0 619 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 FTSJ1Q9UET6 329 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 LNPEPQ9UIQ6 1025 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 PCDHGA1Q9Y5H4 931 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 CSNK1G3Q9Y6M4 447 aa11.24□□□□□ -0.61
ZNF548-211ENST00000600927 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 LY6G6EA0A0G2JKS1 128 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 TRIM38O00635 465 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 FCHO1O14526 889 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CHUKO15111 745 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 SCAMP1O15126 338 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ESRRBO95718 433 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 PCCBP05166 539 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 HIST1H2AGP0C0S8 130 aaPredicted RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 HIST1H2ADP20671 130 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CYP2A7P20853 494 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CALB2P22676 271 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 MPSTP25325 297 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 EEF1DP29692 281 aaKnown RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 RPIAP49247 311 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 HK3P52790 923 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 FOXC1Q12948 553 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ZNF658BQ4V348 819 aaPredicted RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ZNF542PQ5EBM4 170 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 RAET1GQ6H3X3 334 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 TMEM220Q6QAJ8 160 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 MAVSQ7Z434 540 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CPSF7Q8N684 471 aaKnown RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 RASGEF1AQ8N9B8 481 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 FAM181AQ8N9Y4 354 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ATL1Q8WXF7 558 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 TMEM159Q96B96 161 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 FAM136AQ96C01 138 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 RHBDF1Q96CC6 855 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 HIST1H2AHQ96KK5 128 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ZNF382Q96SR6 550 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 HIST1H2AJQ99878 128 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 H2AFJQ9BTM1 129 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 APOOQ9BUR5 198 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 LRRC61Q9BV99 259 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CCDC106Q9BWC9 280 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 SCNM1Q9BWG6 230 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 DPEP2Q9H4A9 486 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 RMI1Q9H9A7 625 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 MARCOQ9UEW3 520 aaPredicted RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 PCTPQ9UKL6 214 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 IKZF3Q9UKT9 509 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 CDYLQ9Y232 598 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 U3KQA8 63 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ARID1BQ8NFD5 2236 aaPredicted RBP11.23□□□□□ -0.61
ZNF548-211ENST00000600927 ACACBO00763 2458 aa11.23□□□□□ -0.61
ZNF548-211ENST00000600927 PABPN1LA6NDY0 278 aaKnown RBP11.22□□□□□ -0.61
ZNF548-211ENST00000600927 CAPN14A8MX76 684 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 H3BM21 787 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 K7ESM1 405 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 E2F3O00716 465 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 AZIN1O14977 448 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 AQP9O43315 295 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 SIGLEC6O43699 453 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 HYAL3O43820 417 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-211ENST00000600927 DIAPH2O60879 1101 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 KATNA1O75449 491 aa11.22□□□□□ -0.61
ZNF548-211ENST00000600927 PSIP1O75475 530 aaKnown RBP11.22□□□□□ -0.61
ZNF548-211ENST00000600927 LDOC1O95751 146 aaPredicted RBP11.22□□□□□ -0.61
ZNF548-211ENST00000600927 UROSP10746 265 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms