RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CBSP35520 551 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 PMS2P54278 862 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 ADARP55265 1226 aaKnown RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 IL10RAQ13651 578 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 DHX34Q14147 1143 aaKnown RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 SF1Q15637 639 aaKnown RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 DEFB110Q30KQ9 67 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 RNF187Q5TA31 235 aaPredicted RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 ZNF385CQ66K41 422 aaPredicted RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 SKA2Q8WVK7 121 aaPredicted RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 DPH2Q9BQC3 489 aaPredicted RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 TRIM4Q9C037 500 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 XAB2Q9HCS7 855 aaKnown RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 SAMD15Q9P1V8 674 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.52□□□□□ -0.09
LIG1-215ENST00000597901 GALPQ9UBC7 116 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 TCFL5Q9UL49 500 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 SNX7Q9UNH6 387 aa14.52□□□□□ -0.09
LIG1-215ENST00000597901 ZNF185O15231 689 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 KIF5CO60282 957 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 PHF2O75151 1096 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 NIPSNAP2O75323 286 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 RFPL1O75677 317 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 PKMP14618 531 aaKnown RBP14.51□□□□□ -0.09
LIG1-215ENST00000597901 OGNP20774 298 aaKnown RBP14.51□□□□□ -0.09
LIG1-215ENST00000597901 CCSMST1Q4G0I0 132 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 LACTB2Q53H82 288 aaPredicted RBP14.51□□□□□ -0.09
LIG1-215ENST00000597901 FAM69BQ5VUD6 431 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 TCTN3Q6NUS6 607 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 TLDC1Q6P9B6 456 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 CILP2Q8IUL8 1156 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 MCATQ8IVS2 390 aaKnown RBP14.51□□□□□ -0.09
LIG1-215ENST00000597901 ZNF655Q8N720 491 aaPredicted RBP14.51□□□□□ -0.09
LIG1-215ENST00000597901 NAT8LQ8N9F0 302 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 ADAMTS17Q8TE56 1095 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 FAM136AQ96C01 138 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 SIGLEC10Q96LC7 697 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 FOPNLQ96NB1 174 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 SERPINB12Q96P63 405 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 TRIM55Q9BYV6 548 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 KCNF1Q9H3M0 494 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 EURLQ9NYK6 297 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 IL1RAPL1Q9NZN1 696 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 ANAPC2Q9UJX6 822 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 SNX12Q9UMY4 172 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 TP53TG5Q9Y2B4 290 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 MRFAP1Q9Y605 127 aa14.51□□□□□ -0.09
LIG1-215ENST00000597901 ZCWPW2A0A1B0GU75 182 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 CES2O00748 559 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 DNAJB5O75953 348 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 MATN4O95460 622 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 MAGP20916 626 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 CCNFP41002 786 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 GRIA3P42263 894 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 CCL11P51671 97 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 THOC5Q13769 683 aaKnown RBP14.5□□□□□ -0.09
LIG1-215ENST00000597901 GBX1Q14549 363 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 ACSBG2Q5FVE4 666 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 C1orf189Q5VU69 101 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 MLIPQ5VWP3 458 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 FCRL6Q6DN72 434 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 RHBDD2Q6NTF9 364 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 FIGLAQ6QHK4 219 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 FAM198BQ6UWH4 519 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 TAX1BP1Q86VP1 789 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 AGGF1Q8N302 714 aaeCLIP14.5□□□□□ -0.09
LIG1-215ENST00000597901 MAGEC3Q8TD91 643 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 GRK7Q8WTQ7 553 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 ZUFSPQ96AP4 578 aa14.5□□□□□ -0.09
LIG1-215ENST00000597901 ZNF669Q96BR6 464 aaPredicted RBP14.5□□□□□ -0.09
LIG1-215ENST00000597901 INTS10Q9NVR2 710 aaKnown RBP14.5□□□□□ -0.09
LIG1-215ENST00000597901 RUVBL2Q9Y230 463 aaKnown RBP14.5□□□□□ -0.09
LIG1-215ENST00000597901 HELZ2Q9BYK8 2649 aaKnown RBP14.49□□□□□ -0.09
LIG1-215ENST00000597901 GOLGA6L10A0A0M3HER8 536 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 CTAGE9A4FU28 777 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 ARGFXA6NJG6 315 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 ZSCAN9O15535 394 aaPredicted RBP14.49□□□□□ -0.09
LIG1-215ENST00000597901 NR1D1P20393 614 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 CASRP41180 1078 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 MAGEA3P43357 314 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 BDKRB1P46663 353 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 FNTAP49354 379 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 DCDP81605 110 aaKnown RBP14.49□□□□□ -0.09
LIG1-215ENST00000597901 TLE1Q04724 770 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 CTBP1Q13363 440 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 NCF4Q15080 339 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 CNSTQ6PJW8 725 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 ASB18Q6ZVZ8 466 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 DENND6AQ8IWF6 608 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 PPIL6Q8IXY8 311 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 RAB42Q8N4Z0 105 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 ZBTB2Q8N680 514 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 HMGCLL1Q8TB92 370 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 DENND1AQ8TEH3 1009 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 GBP5Q96PP8 586 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 RAB11FIP5Q9BXF6 653 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 ING2Q9H160 280 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 INTS7Q9NVH2 962 aaKnown RBP14.49□□□□□ -0.09
LIG1-215ENST00000597901 IRAK4Q9NWZ3 460 aa14.49□□□□□ -0.09
LIG1-215ENST00000597901 DHCR7Q9UBM7 475 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms