RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 PSMB5P28074 263 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 PTGIRP43119 386 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 GCGRP47871 477 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 ADARP55265 1226 aaKnown RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 RPS15P62841 145 aaKnown RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 TLE1Q04724 770 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 NCF4Q15080 339 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 LACTB2Q53H82 288 aaPredicted RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 CNSTQ6PJW8 725 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 OTOAQ7RTW8 1153 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 HOOK3Q86VS8 718 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 CILP2Q8IUL8 1156 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 TMEM151BQ8IW70 566 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 DNAJC22Q8N4W6 341 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 NAT8LQ8N9F0 302 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 OR2L8Q8NGY9 312 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 GIMAP7Q8NHV1 300 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 SEC14L1Q92503 715 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 FAM136AQ96C01 138 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 GBP5Q96PP8 586 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 NLNQ9BYT8 704 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 SPRTNQ9H040 489 aaPredicted RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 DHCR7Q9UBM7 475 aaKnown RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 TLK1Q9UKI8 766 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 TCFL5Q9UL49 500 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 CRYL1Q9Y2S2 319 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 MED16Q9Y2X0 877 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 MYO18BQ8IUG5 2567 aa12.57□□□□□ -0.4
LIG1-212ENST00000596549 UBR5O95071 2799 aaPredicted RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 MDC1Q14676 2089 aaKnown RBP12.57□□□□□ -0.4
LIG1-212ENST00000596549 FAM237BA0A1B0GVD1 139 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 A0A1W2PPV9 198 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 ZSCAN9O15535 394 aaPredicted RBP12.56□□□□□ -0.4
LIG1-212ENST00000596549 KDM1AO60341 852 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 NRP2O60462 931 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 CNOT3O75175 753 aaKnown RBP12.56□□□□□ -0.4
LIG1-212ENST00000596549 OR2B3O76000 313 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 WISP1O95388 367 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 S1PR4O95977 384 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 RPN2P04844 631 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 CBSLP0DN79 551 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 MLNP12872 115 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 FMO4P31512 558 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 CBSP35520 551 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 FOXL2P58012 376 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 DHX34Q14147 1143 aaKnown RBP12.56□□□□□ -0.4
LIG1-212ENST00000596549 RNF187Q5TA31 235 aaPredicted RBP12.56□□□□□ -0.4
LIG1-212ENST00000596549 ARMC3Q5W041 872 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 FCRL6Q6DN72 434 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 ZNF470Q6ECI4 717 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 MRNIPQ6NTE8 343 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 RHBDD2Q6NTF9 364 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 DENND6AQ8IWF6 608 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 MCUQ8NE86 351 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 THAP4Q8WY91 577 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 SLC30A3Q99726 388 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 SERTAD3Q9UJW9 196 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 SNX12Q9UMY4 172 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 SNX7Q9UNH6 387 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 HEATR5BQ9P2D3 2071 aa12.56□□□□□ -0.4
LIG1-212ENST00000596549 ARGFXA6NJG6 315 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 MKRN2OSH3BPM6 223 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 MAP3K7O43318 606 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 KIF5CO60282 957 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ESR1P03372 595 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ERGP11308 486 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 PAMP19021 973 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ITGAXP20702 1163 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ATP5DP30049 168 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 SLC1A2P43004 574 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 FNTAP49354 379 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 SARNPP82979 210 aaKnown RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 ANKRD20A4Q4UJ75 823 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ACSBG2Q5FVE4 666 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 RNASEH2BQ5TBB1 312 aaKnown RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 C1orf189Q5VU69 101 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 TCTN3Q6NUS6 607 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 CASC4Q6P4E1 433 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 GPR135Q8IZ08 494 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ZNF655Q8N720 491 aaPredicted RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 HMGCLL1Q8TB92 370 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 N4BP2L2Q92802 583 aaPredicted RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 TCF12Q99081 682 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 RAB11FIP5Q9BXF6 653 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 SLC7A5P2Q9GIP4 190 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 XAB2Q9HCS7 855 aaKnown RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 FBXO6Q9NRD1 293 aaPredicted RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 INTS10Q9NVR2 710 aaKnown RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
LIG1-212ENST00000596549 SAMD15Q9P1V8 674 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ANAPC2Q9UJX6 822 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 PLCL2Q9UPR0 1127 aa12.55□□□□□ -0.4
LIG1-212ENST00000596549 ANKRD12Q6UB98 2062 aa12.54□□□□□ -0.4
LIG1-212ENST00000596549 ARHGEF33A8MVX0 844 aa12.54□□□□□ -0.4
LIG1-212ENST00000596549 CES2O00748 559 aa12.54□□□□□ -0.4
LIG1-212ENST00000596549 KPNA5O15131 536 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms