RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 ZIK1Q3SY52 487 aaPredicted RBP22.11■■□□□ 1.13
SRRM1-222ENST00000596378 RUNDC3AQ59EK9 446 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 ZDHHC20Q5W0Z9 365 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 B3GNT6Q6ZMB0 384 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 DHRSXQ8N5I4 330 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 TMBIM1Q969X1 311 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 INPP5KQ9BT40 448 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 RIOK2Q9BVS4 552 aaKnown RBP22.11■■□□□ 1.13
SRRM1-222ENST00000596378 PTTG2Q9NZH5 202 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 LIMD1Q9UGP4 676 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 ADGRE2Q9UHX3 823 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 PPT2Q9UMR5 302 aa22.11■■□□□ 1.13
SRRM1-222ENST00000596378 NOTCH4Q99466 2003 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 CXorf51AA0A1B0GTR3 108 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 RAP2AP10114 183 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 CDH2P19022 906 aaPredicted RBP22.1■■□□□ 1.13
SRRM1-222ENST00000596378 VIPR1P32241 457 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 CAPGP40121 348 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 ALDH3B2P48448 385 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 IST1P53990 364 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 FAM98BQ52LJ0 330 aaKnown RBP22.1■■□□□ 1.13
SRRM1-222ENST00000596378 HM13Q8TCT9 377 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 CCDC115Q96NT0 180 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 HEPHQ9BQS7 1158 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 PAIP1Q9H074 479 aaKnown RBP22.1■■□□□ 1.13
SRRM1-222ENST00000596378 SNX6Q9UNH7 406 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 INVSQ9Y283 1065 aa22.1■■□□□ 1.13
SRRM1-222ENST00000596378 CARNS1A5YM72 827 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 PABPN1LA6NDY0 278 aaKnown RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 UPK3BL1B0FP48 263 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 UPK3BL2E5RIL1 263 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 GFYI3L273 518 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 EIF3FO00303 357 aaPredicted RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 CLGNO14967 610 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 EFCAB14O75071 495 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 TULP3O75386 442 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 GMNNO75496 209 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 SDC1P18827 310 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 HALP42357 657 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 CHRNB3Q05901 458 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 LAPTM5Q13571 262 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 PLCL1Q15111 1095 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 PGS1Q32NB8 556 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 CDKL4Q5MAI5 379 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 ELMSAN1Q6PJG2 1045 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 LILRA3Q8N6C8 439 aaPredicted RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 FRS2Q8WU20 508 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 MRGPRX3Q96LB0 322 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 APOLD1Q96LR9 279 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 SERHLQ9NQF3 203 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 DDX18Q9NVP1 670 aaKnown RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 MTCL1Q9Y4B5 1905 aaKnown RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 KIAA0100Q14667 2235 aaKnown RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 TRBV5-3A0A0A0MS03 114 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 WASH3PC4AMC7 463 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 MPC1LP0DKB6 136 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 SLC5A2P31639 672 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 CDKN2CP42773 168 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 MTHFRP42898 656 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 CBX2Q14781 532 aaPredicted RBP22.09■■□□□ 1.13
SRRM1-222ENST00000596378 PLEKHS1Q5SXH7 462 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 BRAT1Q6PJG6 821 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 ING5Q8WYH8 240 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 EBPLQ9BY08 206 aa22.09■■□□□ 1.13
SRRM1-222ENST00000596378 ELOVL7A1L3X0 281 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 C1QCP02747 245 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 TIMP2P16035 220 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 PFKLP17858 780 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 POLR2EP19388 210 aaKnown RBP22.08■■□□□ 1.13
SRRM1-222ENST00000596378 CYP2A7P20853 494 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 ABRQ12979 859 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 ZNF697Q5TEC3 545 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 TCAIMQ8N3R3 496 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 GORASP2Q9H8Y8 452 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 DNAJC11Q9NVH1 559 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 GPRC5BQ9NZH0 403 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 PLXNA2O75051 1894 aa22.08■■□□□ 1.13
SRRM1-222ENST00000596378 H0Y858 1186 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 CXCR6O00574 342 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 C7P10643 843 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 HNMTP50135 292 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 CLDN8P56748 225 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 PFN3P60673 137 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 CHIT1Q13231 466 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 ZNF77Q15935 545 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 GGTA1PQ4G0N0 100 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 KCTD21Q4G0X4 260 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 BORAQ6PGQ7 559 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 CYP2U1Q7Z449 544 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 L3MBTL4Q8NA19 623 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 MCOLN3Q8TDD5 553 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 FAM162AQ96A26 154 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 CXXC1Q9P0U4 656 aaPredicted RBP22.08■■□□□ 1.12
SRRM1-222ENST00000596378 PCDHGA11Q9Y5H2 935 aa22.08■■□□□ 1.12
SRRM1-222ENST00000596378 DEAF1O75398 565 aaPredicted RBP22.07■■□□□ 1.12
SRRM1-222ENST00000596378 CYP2A6P11509 494 aaPredicted RBP22.07■■□□□ 1.12
SRRM1-222ENST00000596378 ZNF30P17039 623 aa22.07■■□□□ 1.12
SRRM1-222ENST00000596378 PTPN2P17706 415 aa22.07■■□□□ 1.12
SRRM1-222ENST00000596378 S100A3P33764 101 aa22.07■■□□□ 1.12
SRRM1-222ENST00000596378 PREPP48147 710 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms