RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 KCNJ9Q92806 393 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 RAB11FIP5Q9BXF6 653 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 KLHL25Q9H0H3 589 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 PLAC1Q9HBJ0 212 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 C20orf96Q9NUD7 363 aaPredicted RBP12.59□□□□□ -0.39
USE1-207ENST00000596136 FBXO5Q9UKT4 447 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 KLK4Q9Y5K2 254 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 MRPS18BQ9Y676 258 aaKnown RBP12.59□□□□□ -0.39
USE1-207ENST00000596136 COMMD10Q9Y6G5 202 aa12.59□□□□□ -0.39
USE1-207ENST00000596136 ISM1B1AKI9 464 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 MEN1O00255 615 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 HCRTR1O43613 425 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 PSIP1O75475 530 aaKnown RBP12.58□□□□□ -0.4
USE1-207ENST00000596136 CREG1O75629 220 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 ERGP11308 486 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 SFTPCP11686 197 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 PAFAH1B1P43034 410 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 ITGA1P56199 1179 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 CYP2A13Q16696 494 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 CCSMST1Q4G0I0 132 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 HSP90AA5PQ58FG0 334 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 ACSBG2Q5FVE4 666 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 PRAMEF17Q5VTA0 474 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 FAM199XQ6PEV8 388 aaPredicted RBP12.58□□□□□ -0.4
USE1-207ENST00000596136 GALNT7Q86SF2 657 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 IGDCC3Q8IVU1 814 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 CNTN4Q8IWV2 1026 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 KLHL7Q8IXQ5 586 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 DSELQ8IZU8 1212 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.4
USE1-207ENST00000596136 C2CD4AQ8NCU7 369 aaPredicted RBP12.58□□□□□ -0.4
USE1-207ENST00000596136 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 DENND1AQ8TEH3 1009 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 RNF31Q96EP0 1072 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 FOPNLQ96NB1 174 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 IL17FQ96PD4 163 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 SLC30A3Q99726 388 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 FAM167BQ9BTA0 163 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 ADNPQ9H2P0 1102 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 FBXO6Q9NRD1 293 aaPredicted RBP12.58□□□□□ -0.4
USE1-207ENST00000596136 PCMTD2Q9NV79 361 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 GEMIN8Q9NWZ8 242 aaKnown RBP12.58□□□□□ -0.4
USE1-207ENST00000596136 SPATA7Q9P0W8 599 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 TUBD1Q9UJT1 453 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 DHRS7Q9Y394 339 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.58□□□□□ -0.4
USE1-207ENST00000596136 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 BAHCC1Q9P281 2608 aa12.58□□□□□ -0.4
USE1-207ENST00000596136 TARM1B6A8C7 271 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 E5RI56 91 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 E7EQ34 232 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 EIF3FO00303 357 aaPredicted RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 TTI1O43156 1089 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 HAUS5O94927 633 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 KLK3P07288 261 aaPredicted RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 CAPN1P07384 714 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 HBQ1P09105 142 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 RAB40ALP0C0E4 278 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 FAM87AP0C7U9 286 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 CYP2A7P20853 494 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 PTPN4P29074 926 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 GCGRP47871 477 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 COL9A2Q14055 689 aaPredicted RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 FRG1Q14331 258 aaKnown RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 ZNF385CQ66K41 422 aaPredicted RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 CYHR1Q6ZMK1 362 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 KCNMB4Q86W47 210 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 PDIK1LQ8N165 341 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 LMNTD1Q8N9Z9 388 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 GIMAP7Q8NHV1 300 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 ASB11Q8WXH4 323 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 SEC14L1Q92503 715 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 ZUFSPQ96AP4 578 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 DPH2Q9BQC3 489 aaPredicted RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 ARHGAP9Q9BRR9 750 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 WDR83Q9BRX9 315 aaKnown RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 AARSD1Q9BTE6 412 aaKnown RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 ACTR5Q9H9F9 607 aaPredicted RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 SLC39A10Q9ULF5 831 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 RUVBL2Q9Y230 463 aaKnown RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 FARSAQ9Y285 508 aaKnown RBP12.57□□□□□ -0.4
USE1-207ENST00000596136 TEX264Q9Y6I9 313 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 AP1M2Q9Y6Q5 423 aa12.57□□□□□ -0.4
USE1-207ENST00000596136 A0A1W2PPV9 198 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 ARHGEF33A8MVX0 844 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 GFYI3L273 518 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 MYO1CO00159 1063 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 ZNF749O43361 778 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 KATNA1O75449 491 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 BANF1O75531 89 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 F7P08709 466 aaPredicted RBP12.56□□□□□ -0.4
USE1-207ENST00000596136 FURINP09958 794 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 MPC1LP0DKB6 136 aa12.56□□□□□ -0.4
USE1-207ENST00000596136 CBSLP0DN79 551 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms