RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 MENTQ9BUN1 341 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 LHPPQ9H008 270 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 MRM3Q9HC36 420 aaKnown RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 ENAMQ9NRM1 1142 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 IRAK4Q9NWZ3 460 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 SMARCAL1Q9NZC9 954 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 CDC23Q9UJX2 597 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 EFR3BQ9Y2G0 817 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 KLHL20Q9Y2M5 609 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 TDRKHQ9Y2W6 561 aaKnown RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 VSTM2BA6NLU5 285 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 QSOX1O00391 747 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 DSCR3O14972 297 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 FTH1P02794 183 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 TPH1P17752 444 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 MCM3P25205 808 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 FOXN2P32314 431 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 RAB28P51157 221 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 EIF3EP60228 445 aaKnown RBP9.56□□□□□ -0.88
LIG1-209ENST00000596104 COPS2P61201 443 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 PLOD1Q02809 727 aaPredicted RBP9.56□□□□□ -0.88
LIG1-209ENST00000596104 MFAP5Q13361 173 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 CCDC181Q5TID7 509 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 ZNF324BQ6AW86 544 aaPredicted RBP9.56□□□□□ -0.88
LIG1-209ENST00000596104 C11orf63Q6NUN7 778 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 RPUSD3Q6P087 351 aaKnown RBP9.56□□□□□ -0.88
LIG1-209ENST00000596104 TMTC1Q8IUR5 882 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 VSTM4Q8IW00 320 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 PARP9Q8IXQ6 854 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 LMNTD1Q8N9Z9 388 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 OR11G2Q8NGC1 345 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 STYXQ8WUJ0 223 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 CNDP1Q96KN2 507 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 PPP1R2P1Q96PQ5 205 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 PHF12Q96QT6 1004 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 FAM118BQ9BPY3 351 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 FERMT1Q9BQL6 677 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 MESP1Q9BRJ9 268 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 EPS8L2Q9H6S3 715 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 CTSFQ9UBX1 484 aa9.56□□□□□ -0.88
LIG1-209ENST00000596104 NXT1Q9UKK6 140 aaKnown RBP9.56□□□□□ -0.88
LIG1-209ENST00000596104 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.56□□□□□ -0.88
LIG1-209ENST00000596104 FBN2P35556 2912 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 APCP25054 2843 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 A0A1B0GUH1 482 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 MACROD2A1Z1Q3 448 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 MROH6A6NGR9 719 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 OR51F1A6NGY5 319 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 PRSS44E7EML9 344 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 STK10O94804 968 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 KLHL18O94889 574 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 PIM1P11309 404 aaPredicted RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 GRNP28799 593 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 CTNNA1P35221 906 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 PTPN7P35236 360 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 MAGEA1P43355 309 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 TDGF1P3P51864 188 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 GRB7Q14451 532 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 POU6F1Q14863 301 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 TUBB8Q3ZCM7 444 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 DNAJC21Q5F1R6 531 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 IRAK1BP1Q5VVH5 260 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 YOD1Q5VVQ6 348 aaPredicted RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 FCRL6Q6DN72 434 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 DARS2Q6PI48 645 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 FAM180AQ6UWF9 173 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 ISLR2Q6UXK2 745 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 LINC00696Q6ZRV3 163 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 SHISA6Q6ZSJ9 500 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 FJX1Q86VR8 437 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 MCEMP1Q8IX19 187 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 DTWD1Q8N5C7 304 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 BCORP1Q8N888 145 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 CATSPER1Q8NEC5 780 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 DENND1AQ8TEH3 1009 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 RELTQ969Z4 430 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 MOCOSQ96EN8 888 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 THOC3Q96J01 351 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 LMF1Q96S06 567 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 OSBPL8Q9BZF1 889 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 SOX17Q9H6I2 414 aaPredicted RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 LUC7LQ9NQ29 371 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 SEMA3GQ9NS98 782 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 CUTCQ9NTM9 273 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 OLAHQ9NV23 265 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 TFR2Q9UP52 801 aa9.55□□□□□ -0.88
LIG1-209ENST00000596104 DIDO1Q9BTC0 2240 aaKnown RBP9.55□□□□□ -0.88
LIG1-209ENST00000596104 HEATR9A2RTY3 570 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 CCDC162PA2VCL2 907 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 FITM1A5D6W6 292 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 PCDH17O14917 1159 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 CBFA2T2O43439 604 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 KDM1AO60341 852 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 OR1I1O60431 355 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 JRKO75564 520 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 MED26O95402 600 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 METTL18O95568 372 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 S1PR4O95977 384 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 HPP00738 406 aa9.54□□□□□ -0.88
LIG1-209ENST00000596104 TPM1P09493 284 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms