RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ACTR10Q9NZ32 417 aa13.21□□□□□ -0.29
SHKBP1-208ENST00000595726 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
SHKBP1-208ENST00000595726 CACNA1CQ13936 2221 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 MACROD2A1Z1Q3 448 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 C2orf74A8MZ97 194 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 GOLGA6L6A8MZA4 724 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 GAPDHSO14556 408 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 SLC19A2O60779 497 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 PMPCBO75439 489 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 AKT1P31749 480 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 PTPN7P35236 360 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 SMSP52788 366 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 WASHC5Q12768 1159 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 KIF5AQ12840 1032 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 PTPRCAPQ14761 206 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 NKG7Q16617 165 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 LONRF2Q1L5Z9 754 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 OVCH1Q7RTY7 1134 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 AMIGO1Q86WK6 493 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 TXLNBQ8N3L3 684 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 AMER2Q8N7J2 671 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 ALG3Q92685 438 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 NRGNQ92686 78 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 NACC2Q96BF6 587 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 TEKT5Q96M29 485 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 SPSB2Q99619 263 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 ZNF160Q9HCG1 818 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 PTGFRNQ9P2B2 879 aa13.2□□□□□ -0.3
SHKBP1-208ENST00000595726 TRAV17A0A0B4J275 112 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 DYTNA2CJ06 578 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 SGTAO43765 313 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 NDST3O95803 873 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 DRD2P14416 443 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 MSH3P20585 1137 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 AGAP20933 346 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 CD68P34810 354 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 HMGCLP35914 325 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 SPAM1P38567 509 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 RWDD2BP57060 319 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 PMP22Q01453 160 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 RBBP7Q16576 425 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 AADACL2Q6P093 401 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 SPESP1Q6UW49 350 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 TTLL10Q6ZVT0 673 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 COX15Q7KZN9 410 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 HOOK3Q86VS8 718 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 PSMF1Q92530 271 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 OSBPL8Q9BZF1 889 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 ENKD1Q9H0I2 346 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 SPHK1Q9NYA1 384 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 IL17CQ9P0M4 197 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 ABI3Q9P2A4 366 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 EFR3BQ9Y2G0 817 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 CAPN6Q9Y6Q1 641 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 FLNAP21333 2647 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 NUP210LQ5VU65 1888 aa13.19□□□□□ -0.3
SHKBP1-208ENST00000595726 NCOA6Q14686 2063 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 GLYATL1P3A0A0U1RQE8 302 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 ZNHIT1O43257 154 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 RASAL1O95294 804 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 PYGMP11217 842 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 UGT2B7P16662 529 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 NFKB1P19838 968 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 CHRNA4P43681 627 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 CASP6P55212 293 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 RBPJQ06330 500 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 PEX26Q7Z412 305 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 ZNF567Q8N184 647 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 DNAJC22Q8N4W6 341 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 DTWD1Q8N5C7 304 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 SIRT6Q8N6T7 355 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 ACTL9Q8TC94 416 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 OR2A14Q96R47 310 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 VAT1Q99536 393 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 HGH1Q9BTY7 390 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 TFB2MQ9H5Q4 396 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 KLHL8Q9P2G9 620 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 CTSFQ9UBX1 484 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 AMFRQ9UKV5 643 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 PACSIN2Q9UNF0 486 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 HEBP2Q9Y5Z4 205 aa13.18□□□□□ -0.3
SHKBP1-208ENST00000595726 C17orf113A0A1B0GUU1 675 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 FTCDO95954 541 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 RBL1P28749 1068 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 PDHA2P29803 388 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 CCDC181Q5TID7 509 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 TLDC1Q6P9B6 456 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 KDELC1Q6UW63 502 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
SHKBP1-208ENST00000595726 SLC25A41Q8N5S1 370 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms