RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 APOBEC2Q9Y235 224 aaKnown RBP21.84■■□□□ 1.09
SNRNP70-204ENST00000595231 RGS16O15492 202 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 CPNE6O95741 557 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 GUCA1CO95843 209 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 CDK4P11802 303 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 POLR2CP19387 275 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 SLC18A2Q05940 514 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 FASTKQ14296 549 aaKnown RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 ARHGAP19Q14CB8 494 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 TSNAXIP1Q2TAA8 658 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 ANKS6Q68DC2 871 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 KLHL35Q6PF15 583 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 WDR74Q6RFH5 385 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 DHRS13Q6UX07 377 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 ZNF574Q6ZN55 896 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 GPSM1Q86YR5 675 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 TMEM151AQ8N4L1 468 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 C2orf73Q8N5S3 287 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 PGM2Q96G03 612 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 GFM1Q96RP9 751 aaKnown RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 RAB11FIP5Q9BXF6 653 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 SPHK1Q9NYA1 384 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 STOX2Q9P2F5 926 aaPredicted RBP21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 EPHA6Q9UF33 1036 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 SPTBN4Q9H254 2564 aa21.83■■□□□ 1.09
SNRNP70-204ENST00000595231 CCDC189A1A4V9 331 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 E7ENX8 843 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 KERAO60938 352 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 CHRM5P08912 532 aaPredicted RBP21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 PEBP1P30086 187 aaKnown RBP21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 PPP1CAP62136 330 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 CDKL1Q00532 357 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 TAP2Q03519 686 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 PUM1Q14671 1186 aaKnown RBP eCLIP21.82■■□□□ 1.081e-13■□□□□ 11.1
SNRNP70-204ENST00000595231 TECRLQ5HYJ1 363 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 KLC3Q6P597 504 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 CDHR3Q6ZTQ4 885 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 LCA5Q86VQ0 697 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 OOSP2Q86WS3 158 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 LRRC56Q8IYG6 542 aaPredicted RBP21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 C4orf33Q8N1A6 199 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 WDR48Q8TAF3 677 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 VIPAS39Q9H9C1 493 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 TMEM216Q9P0N5 145 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 TMEM9Q9P0T7 183 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 RNF112Q9ULX5 631 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 PRICKLE3O43900 615 aaPredicted RBP21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 MTHFD2P13995 350 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 HSD17B2P37059 387 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 PNLIPRP1P54315 467 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 CLPPQ16740 277 aaPredicted RBP21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 FRA10AC1Q70Z53 315 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 SRRM1Q8IYB3 904 aaKnown RBP21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 RAB42Q8N4Z0 105 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 PPFIBP2Q8ND30 876 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 FLVCR1-AS1Q8TAF5 88 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 SYNDIG1Q9H7V2 258 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 DCDC2Q9UHG0 476 aa21.82■■□□□ 1.08
SNRNP70-204ENST00000595231 A0A1W2PPV9 198 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 D6RAR5 112 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 MAP2K7O14733 419 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 CAPN5O15484 640 aaPredicted RBP21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 C9P02748 559 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 GSTA1P08263 222 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 SBK3P0C264 359 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 CREB1P16220 341 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 GFERP55789 205 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 CLDN6P56747 220 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 SPIDRQ14159 915 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 CDCP2Q5VXM1 449 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 TMEM71Q6P5X7 295 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 AGTRAPQ6RW13 159 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 FBXL8Q96CD0 374 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 CENPHQ9H3R5 247 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 ZNF446Q9NWS9 450 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 PDP2Q9P2J9 529 aa21.81■■□□□ 1.08
SNRNP70-204ENST00000595231 PCM1Q15154 2024 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 PIPSLA2A3N6 862 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 SASH3O75995 380 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 RBP1P09455 135 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 MYZAPP0CAP1 466 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 CRHR1P34998 444 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 PPM1FP49593 454 aaPredicted RBP21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 PDX1P52945 283 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 PLXDC1Q8IUK5 500 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 SYTL1Q8IYJ3 562 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 BANPQ8N9N5 519 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 RHBDF1Q96CC6 855 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 TSNARE1Q96NA8 513 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 OR2A14Q96R47 310 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 TMBIM4Q9HC24 238 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 ACTR10Q9NZ32 417 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 XPR1Q9UBH6 696 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 ENTPD2Q9Y5L3 495 aa21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 MN1Q10571 1320 aaPredicted RBP21.8■■□□□ 1.08
SNRNP70-204ENST00000595231 NCF1BA6NI72 391 aaPredicted RBP21.79■■□□□ 1.08
SNRNP70-204ENST00000595231 NCF1CA8MVU1 366 aaPredicted RBP21.79■■□□□ 1.08
SNRNP70-204ENST00000595231 TARM1B6A8C7 271 aa21.79■■□□□ 1.08
SNRNP70-204ENST00000595231 ANXA5P08758 320 aa21.79■■□□□ 1.08
SNRNP70-204ENST00000595231 NCF1P14598 390 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms