RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 POU6F1Q14863 301 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 ZIC1Q15915 447 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 DBN1Q16643 649 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 NKAIN1Q4KMZ8 207 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 TLDC1Q6P9B6 456 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 DRICH1Q6PGQ1 229 aaPredicted RBP14.2□□□□□ -0.14
PNKP-202ENST00000593706 IGFL3Q6UXB1 125 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 C1orf54Q8WWF1 131 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 OR2A14Q96R47 310 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 SPRTNQ9H040 489 aaPredicted RBP14.2□□□□□ -0.14
PNKP-202ENST00000593706 SPHK1Q9NYA1 384 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 COPG1Q9Y678 874 aaKnown RBP14.2□□□□□ -0.14
PNKP-202ENST00000593706 CPAMD8Q8IZJ3 1885 aa14.2□□□□□ -0.14
PNKP-202ENST00000593706 NSG1P42857 185 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 GLRBP48167 497 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 FOXL2P58012 376 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 PPP1R32Q7Z5V6 425 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 PRUNE1Q86TP1 453 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 PIANPQ8IYJ0 282 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 TBC1D21Q8IYX1 336 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 TRIM58Q8NG06 486 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 OR5K2Q8NHB8 316 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 PTERQ96BW5 349 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 ZNF552Q9H707 407 aaPredicted RBP14.19□□□□□ -0.14
PNKP-202ENST00000593706 ATP13A2Q9NQ11 1180 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 AGPAT4Q9NRZ5 378 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 PIH1D1Q9NWS0 290 aaKnown RBP14.19□□□□□ -0.14
PNKP-202ENST00000593706 OR6C2Q9NZP2 312 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 PLAGL1Q9UM63 463 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 APCP25054 2843 aa14.19□□□□□ -0.14
PNKP-202ENST00000593706 ERI2A8K979 691 aaKnown RBP14.18□□□□□ -0.14
PNKP-202ENST00000593706 H3BMH7 237 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 AGPSO00116 658 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 MASP2O00187 686 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 CTSBP07858 339 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 OR56A5P0C7T3 313 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 ETS1P14921 441 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 TPH1P17752 444 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 MSNP26038 577 aaKnown RBP14.18□□□□□ -0.14
PNKP-202ENST00000593706 GABRA4P48169 554 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 AIMP2Q13155 320 aaKnown RBP14.18□□□□□ -0.14
PNKP-202ENST00000593706 CCNG2Q16589 344 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 IRAK1BP1Q5VVH5 260 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 MRPL14Q6P1L8 145 aaKnown RBP14.18□□□□□ -0.14
PNKP-202ENST00000593706 NAPRTQ6XQN6 538 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 TAB3Q8N5C8 712 aaPredicted RBP14.18□□□□□ -0.14
PNKP-202ENST00000593706 STYXQ8WUJ0 223 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 DLG3Q92796 817 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 INPP5DQ92835 1189 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 CDKN2AIPNLQ96HQ2 116 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 CHRNA10Q9GZZ6 450 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 ETNK1Q9HBU6 452 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 PLCL2Q9UPR0 1127 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 ZKSCAN5Q9Y2L8 839 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 PCDHGA10Q9Y5H3 936 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 PRSS21Q9Y6M0 314 aa14.18□□□□□ -0.14
PNKP-202ENST00000593706 MYO7BQ6PIF6 2116 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 WIPF3A6NGB9 483 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 PSMD3O43242 534 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 CNOT3O75175 753 aaKnown RBP14.17□□□□□ -0.14
PNKP-202ENST00000593706 UMODP07911 640 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 MAGP20916 626 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 ALAS2P22557 587 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 ACADLP28330 430 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 GRIA1P42261 906 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 CSE1LP55060 971 aaKnown RBP14.17□□□□□ -0.14
PNKP-202ENST00000593706 SNX1Q13596 522 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 ITIH4Q14624 930 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 KIR2DS3Q14952 304 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 SLC5A12Q1EHB4 618 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 PACS1Q6VY07 963 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 Q6ZS92 163 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 LINC00523Q86TU6 105 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 CUZD1Q86UP6 607 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 OR52K1Q8NGK4 314 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 FLVCR1-AS1Q8TAF5 88 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 RANBP9Q96S59 729 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 WDR77Q9BQA1 342 aaPredicted RBP14.17□□□□□ -0.14
PNKP-202ENST00000593706 ZBTB20Q9HC78 741 aaPredicted RBP14.17□□□□□ -0.14
PNKP-202ENST00000593706 CDC23Q9UJX2 597 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 FBXL4Q9UKA2 621 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 ZNF148Q9UQR1 794 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 NTNG1Q9Y2I2 539 aa14.17□□□□□ -0.14
PNKP-202ENST00000593706 OR51F1A6NGY5 319 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 F8W8V4 182 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 ALOX12BO75342 701 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 IFNB1P01574 187 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 FGGP02679 453 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 ZSCAN5DPP0CG00 497 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 PEBP1P30086 187 aaKnown RBP14.16□□□□□ -0.14
PNKP-202ENST00000593706 RPL22P35268 128 aaKnown RBP14.16□□□□□ -0.14
PNKP-202ENST00000593706 FDFT1P37268 417 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 SOX8P57073 446 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 PLOD1Q02809 727 aaPredicted RBP14.16□□□□□ -0.14
PNKP-202ENST00000593706 ACVR1Q04771 509 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 HIF1AQ16665 826 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 TTLL10Q6ZVT0 673 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 OR13J1Q8NGT2 312 aa14.16□□□□□ -0.14
PNKP-202ENST00000593706 DENND1AQ8TEH3 1009 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms