RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RAB6BQ9NRW1 208 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 P4HTMQ9NXG6 502 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 EURLQ9NYK6 297 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 C5AR2Q9P296 337 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 RIMKLBQ9ULI2 386 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 ESPL1Q14674 2120 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 SEMA7AO75326 666 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 CD63P08962 238 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 ALAS2P22557 587 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 ACVR1Q04771 509 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 MRPL49Q13405 166 aaKnown RBP19.69■□□□□ 0.74
TRIM47-207ENST00000593089 C4orf17Q53FE4 359 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 MRPL14Q6P1L8 145 aaKnown RBP19.69■□□□□ 0.74
TRIM47-207ENST00000593089 KRT222Q8N1A0 295 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 GALNT16Q8N428 558 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 SSC4DQ8WTU2 575 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 ASZ1Q8WWH4 475 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 PTERQ96BW5 349 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 CARD6Q9BX69 1037 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 SLC29A3Q9BZD2 475 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 CASS4Q9NQ75 786 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.69■□□□□ 0.74
TRIM47-207ENST00000593089 ANAPC5Q9UJX4 755 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 TCAF1Q9Y4C2 921 aa19.69■□□□□ 0.74
TRIM47-207ENST00000593089 RP1L1Q8IWN7 2480 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 KRT86O43790 486 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 GPC4O75487 556 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 RPN2P04844 631 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 APOA4P06727 396 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 UMODP07911 640 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 CD9P21926 228 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 PPARGP37231 505 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 MYBPC3Q14896 1274 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 EIF2S3LQ2VIR3 472 aaKnown RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 PLEKHN1Q494U1 663 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 TTLL10Q6ZVT0 673 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 NLRP9Q7RTR0 991 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 PPP1R32Q7Z5V6 425 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 DCUN1D3Q8IWE4 304 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 PPHLN1Q8NEY8 458 aaKnown RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 C19orf60Q96EN9 201 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 MENTQ9BUN1 341 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 FRMD8P1Q9BZ68 369 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 CATSPERZQ9NTU4 200 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 PLEKHB1Q9UF11 243 aaPredicted RBP19.68■□□□□ 0.74
TRIM47-207ENST00000593089 ICE1Q9Y2F5 2266 aa19.68■□□□□ 0.74
TRIM47-207ENST00000593089 NUP210LQ5VU65 1888 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 IGHEP01854 428 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 APRTP07741 180 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 GRB7Q14451 532 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 CYP2A13Q16696 494 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 UNC5DQ6UXZ4 953 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 SLC13A5Q86YT5 568 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-207ENST00000593089 MCATQ8IVS2 390 aaKnown RBP19.67■□□□□ 0.74
TRIM47-207ENST00000593089 CCDC89Q8N998 374 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 DLG3Q92796 817 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 SLC22A18Q96BI1 424 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 ZNF552Q9H707 407 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-207ENST00000593089 CHRAC1Q9NRG0 131 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 SLC22A11Q9NSA0 550 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 MARCH4Q9P2E8 410 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-207ENST00000593089 ANKRD12Q6UB98 2062 aa19.67■□□□□ 0.74
TRIM47-207ENST00000593089 SPTAN1Q13813 2472 aaKnown RBP19.67■□□□□ 0.74
TRIM47-207ENST00000593089 UTP20O75691 2785 aaKnown RBP19.66■□□□□ 0.74
TRIM47-207ENST00000593089 NBPF19A0A087WUL8 3843 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 ALPPP05187 535 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 ZSCAN5DPP0CG00 497 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 RNF224P0DH78 156 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 VARSP26640 1264 aaKnown RBP19.66■□□□□ 0.74
TRIM47-207ENST00000593089 GRIA3P42263 894 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 TMED2Q15363 201 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 SF1Q15637 639 aaKnown RBP19.66■□□□□ 0.74
TRIM47-207ENST00000593089 AARS2Q5JTZ9 985 aaKnown RBP19.66■□□□□ 0.74
TRIM47-207ENST00000593089 IQCKQ8N0W5 287 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 SPC24Q8NBT2 197 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 OR2L8Q8NGY9 312 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 PRR7Q8TB68 274 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 SNRNP40Q96DI7 357 aaKnown RBP19.66■□□□□ 0.74
TRIM47-207ENST00000593089 SLC39A10Q9ULF5 831 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 B3GNT3Q9Y2A9 372 aa19.66■□□□□ 0.74
TRIM47-207ENST00000593089 A0A1B0GX78 115 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 PRMT5O14744 637 aaPredicted RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 RASGRF2O14827 1237 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 CD3EAPO15446 510 aaKnown RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 S1PR4O95977 384 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 ITGAXP20702 1163 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 MCM3P25205 808 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 AOAHP28039 575 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 GCGRP47871 477 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 ARSFP54793 590 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 SESN2P58004 480 aaPredicted RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 PCID2Q5JVF3 399 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 FCRL6Q6DN72 434 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 PTRHD1Q6GMV3 140 aaKnown RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 FIGLAQ6QHK4 219 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 CISD2Q8N5K1 135 aaKnown RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 RNF10Q8N5U6 811 aaKnown RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 PEX13Q92968 403 aa19.65■□□□□ 0.74
TRIM47-207ENST00000593089 ILKAPQ9H0C8 392 aaPredicted RBP19.65■□□□□ 0.74
TRIM47-207ENST00000593089 ATP13A2Q9NQ11 1180 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms