RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PTCHD3Q3KNS1 767 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 CRTC2Q53ET0 693 aaPredicted RBP14.65□□□□□ -0.06
ERCC1-213ENST00000592023 LCN10Q6JVE6 187 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 SYTL1Q8IYJ3 562 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 GPR135Q8IZ08 494 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 DSELQ8IZU8 1212 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.65□□□□□ -0.06
ERCC1-213ENST00000592023 APOBEC4Q8WW27 367 aaKnown RBP14.65□□□□□ -0.06
ERCC1-213ENST00000592023 SLCO2A1Q92959 643 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 RAD51AP1Q96B01 352 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 SIGLEC10Q96LC7 697 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 FOPNLQ96NB1 174 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 LRFN5Q96NI6 719 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 RAB11FIP5Q9BXF6 653 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 ADNPQ9H2P0 1102 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 IRAK4Q9NWZ3 460 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 POLHQ9Y253 713 aa14.65□□□□□ -0.06
ERCC1-213ENST00000592023 ZNF749O43361 778 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 OR2B3O76000 313 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 CTSBP07858 339 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 PGAM1P18669 254 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 PTPN4P29074 926 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 ATP5DP30049 168 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 PTGIRP43119 386 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 GABRA4P48169 554 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 MPP1Q00013 466 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 DHX9Q08211 1270 aaKnown RBP14.64□□□□□ -0.07
ERCC1-213ENST00000592023 ACSBG2Q5FVE4 666 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 PAPD7Q5XG87 772 aaKnown RBP14.64□□□□□ -0.07
ERCC1-213ENST00000592023 FAM198BQ6UWH4 519 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 PRICKLE2Q7Z3G6 844 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 SPNS2Q8IVW8 549 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 RAB42Q8N4Z0 105 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 SLC30A3Q99726 388 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 FAM117AQ9C073 453 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 SLC25A18Q9H1K4 315 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 CCDC68Q9H2F9 335 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 STARD5Q9NSY2 213 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-213ENST00000592023 PCYOX1Q9UHG3 505 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 HEMK1Q9Y5R4 338 aaPredicted RBP14.64□□□□□ -0.07
ERCC1-213ENST00000592023 MRFAP1Q9Y605 127 aa14.64□□□□□ -0.07
ERCC1-213ENST00000592023 SLC28A2O43868 658 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 PSMB5P28074 263 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 CCNFP41002 786 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 DR1Q01658 176 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 CUL1Q13616 776 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 IL10RAQ13651 578 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 CRYMQ14894 314 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 SF1Q15637 639 aaKnown RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 KLHL38Q2WGJ6 581 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 HSP90AA5PQ58FG0 334 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 ZNF517Q6ZMY9 492 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 SYVN1Q86TM6 617 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 KCNMB4Q86W47 210 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 LMNTD2Q8IXW0 634 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 ENDOVQ8N8Q3 282 aaKnown RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 GIMAP7Q8NHV1 300 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 C9orf43Q8TAL5 461 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 CALML6Q8TD86 181 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 DENND1AQ8TEH3 1009 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 SLC22A18Q96BI1 424 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 TRIM51Q9BSJ1 452 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 FAM167BQ9BTA0 163 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 GPR87Q9BY21 358 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 CHRNA10Q9GZZ6 450 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 SPRTNQ9H040 489 aaPredicted RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 IARS2Q9NSE4 1012 aaKnown RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 SPATA7Q9P0W8 599 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 FBXO5Q9UKT4 447 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 FARSAQ9Y285 508 aaKnown RBP14.63□□□□□ -0.07
ERCC1-213ENST00000592023 MAN2B2Q9Y2E5 1009 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 KCNMB2Q9Y691 235 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 SAR1BQ9Y6B6 198 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 FAM169AQ9Y6X4 670 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 COL6A6A6NMZ7 2263 aa14.63□□□□□ -0.07
ERCC1-213ENST00000592023 ARHGEF33A8MVX0 844 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 FANCGO15287 622 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 ZSCAN9O15535 394 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-213ENST00000592023 HBQ1P09105 142 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 CLCN7P51798 805 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 UGT8Q16880 541 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 TTLL9Q3SXZ7 439 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 MSS51Q4VC12 460 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 C1orf189Q5VU69 101 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 FAM69BQ5VUD6 431 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 ZNF549Q6P9A3 640 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 PCGF5Q86SE9 256 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 DNAJC22Q8N4W6 341 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 ZNF655Q8N720 491 aaPredicted RBP14.62□□□□□ -0.07
ERCC1-213ENST00000592023 MAGEC3Q8TD91 643 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 INTS7Q9NVH2 962 aaKnown RBP14.62□□□□□ -0.07
ERCC1-213ENST00000592023 DHCR7Q9UBM7 475 aaKnown RBP14.62□□□□□ -0.07
ERCC1-213ENST00000592023 TUBD1Q9UJT1 453 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 SNX7Q9UNH6 387 aa14.62□□□□□ -0.07
ERCC1-213ENST00000592023 PLCL2Q9UPR0 1127 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms