RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ATXN1P54253 815 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 C2orf80Q0P641 193 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 PPM1JQ5JR12 505 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF781Q8N8C0 355 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 RIT1Q92963 219 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 B3GALT2O43825 422 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 RPLP0P05388 317 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 LAMP2P13473 410 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC7A1P30825 629 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 RASGRP3Q8IV61 690 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF366Q8N895 744 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CLHC1Q8NHS4 586 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 MFSD3Q96ES6 412 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CDCA3Q99618 268 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 A0A1W2PQ72 361 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 ORC5O43913 435 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 TOP3BO95985 862 aaKnown RBP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 RLN1P04808 185 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 GNAZP19086 355 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 CSTF2P33240 577 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 IFI44LQ53G44 452 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 USP43Q70EL4 1123 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 PRSS58Q8IYP2 241 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 SIX5Q8N196 739 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 C10orf82Q8WW14 230 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 TOP1MTQ969P6 601 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 MIPEPQ99797 713 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 PIGVQ9NUD9 493 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 ZDHHC3Q9NYG2 299 aa13.05□□□□□ -0.32
SMARCA4-216ENST00000591545 M0R2N6 131 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 PIRO00625 290 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 CCL22O00626 93 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 HSPA7P48741 367 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 MPP1Q00013 466 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 NRG1Q02297 640 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 AKIRIN2Q53H80 203 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 C22orf39Q6P5X5 142 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 KBTBD6Q86V97 674 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 C12orf76Q8N812 135 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 TTLQ8NG68 377 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 C9orf43Q8TAL5 461 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 PCYT2Q99447 389 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 EHD1Q9H4M9 534 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 UPB1Q9UBR1 384 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 PCDHGA11Q9Y5H2 935 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 HS3ST4Q9Y661 456 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 COL2A1P02458 1487 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 FAM234BA2RU67 622 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 CXCR6O00574 342 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 EEFSECP57772 596 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 UPP1Q16831 310 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 SWI5Q1ZZU3 235 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 KCTD8Q6ZWB6 473 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 VANGL1Q8TAA9 524 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 KBTBD7Q8WVZ9 684 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 MNTQ99583 582 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 ANKHQ9HCJ1 492 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 EQTNQ9NQ60 294 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 TIMM22Q9Y584 194 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 E7ENX8 843 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 KLF8O95600 359 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 KLK3P07288 261 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 FESP07332 822 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 RGS8P57771 180 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 ZBTB6Q15916 424 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 GPR65Q8IYL9 337 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 TWNKQ96RR1 684 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 SMOQ99835 787 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 KCNS3Q9BQ31 491 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 PAK6Q9NQU5 681 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 C1orf109Q9NX04 203 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 OSER1Q9NX31 292 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 ZNF99A8MXY4 864 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 TUBA4AP68366 448 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 E2F2Q14209 437 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 RBM48Q5RL73 367 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 VWA5B1Q5TIE3 1220 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 ZBTB46Q86UZ6 589 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 GAL3ST4Q96RP7 486 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 HERC2P3Q9BVR0 1158 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 SALL4Q9UJQ4 1053 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 RUVBL1Q9Y265 456 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 DGKBQ9Y6T7 804 aa13.04□□□□□ -0.32
SMARCA4-216ENST00000591545 MAGEB17A8MXT2 336 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 SLC22A1O15245 554 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 AQP4P55087 323 aa13.03□□□□□ -0.32
SMARCA4-216ENST00000591545 CA9Q16790 459 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms