RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 TNFRSF8P28908 595 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 MAPK9P45984 424 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CLCNKAP51800 687 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 LIMK1P53667 647 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 GPX6P59796 221 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SNRPNP63162 240 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 GUCY1A3Q02108 690 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 DNAJC3Q13217 504 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 KYNUQ16719 465 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ERCC6LQ2NKX8 1250 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 FAM153CQ494X1 144 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ZNF789Q5FWF6 425 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 RBM20Q5T481 1227 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 GUSBP11Q6P575 273 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ZNF449Q6P9G9 518 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ABHD17CQ6PCB6 329 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CNSTQ6PJW8 725 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SEZ6L2Q6UXD5 910 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 EFL1Q7Z2Z2 1120 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 PIM3Q86V86 326 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 LRRC6Q86X45 466 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 NRROSQ86YC3 692 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SFTPA2Q8IWL1 248 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 LMNTD2Q8IXW0 634 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SLC35F3Q8IY50 421 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SLC25A45Q8N413 288 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 LILRA3Q8N6C8 439 aaPredicted RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ARL10Q8N8L6 244 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 GPR150Q8NGU9 434 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 MAPK15Q8TD08 544 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SLC37A2Q8TED4 501 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CXorf40BQ96DE9 158 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SCARF2Q96GP6 870 aaPredicted RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ELMO2Q96JJ3 720 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 RMDN2Q96LZ7 410 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CCM2Q9BSQ5 444 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 HGH1Q9BTY7 390 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 DUSP23Q9BVJ7 150 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 WWP1Q9H0M0 922 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 P2RY12Q9H244 342 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 SLC32A1Q9H598 525 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 STN1Q9H668 368 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 AKTIPQ9H8T0 292 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 COG4Q9H9E3 785 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 PRDM8Q9NQV8 689 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 IMP3Q9NV31 184 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 NSMCE4AQ9NXX6 385 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ZIM2Q9NZV7 527 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 TBC1D29Q9UFV1 150 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 TRMT6Q9UJA5 497 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 PCDHB1Q9Y5F3 818 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ST14Q9Y5Y6 855 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 PSAT1Q9Y617 370 aa6.26□□□□□ -1.41
VPS4B-205ENST00000591383 CFAP20Q9Y6A4 193 aaKnown RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
VPS4B-205ENST00000591383 TRBV23OR9-2A0A075B6M9 112 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 SPAARA0A1B0GVQ0 90 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 EXOC1LA0A1B0GW35 172 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 CPED1A4D0V7 1026 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 MGAT4DA6NG13 374 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 FAM159BA6NKW6 160 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 SMIM23A6NLE4 172 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 OR52A4PA6NMU1 304 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 RHPN2P1A8MT19 583 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 CXorf49A8MYA2 514 aaPredicted RBP6.25□□□□□ -1.41
VPS4B-205ENST00000591383 H3BMM5 538 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 VPS26AO75436 327 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 EML2O95834 649 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 APOA4P06727 396 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 F3P13726 295 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 PKMP14618 531 aaKnown RBP6.25□□□□□ -1.41
VPS4B-205ENST00000591383 CHRM3P20309 590 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 IDSP22304 550 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 RPS3P23396 243 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS4B-205ENST00000591383 MCM3P25205 808 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 GNALP38405 381 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 PMS2P54278 862 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 POU4F1Q01851 419 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 DMPKQ09013 629 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 HSPA14Q0VDF9 509 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 CDK5R2Q13319 367 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 SLC14A1Q13336 389 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 NAB1Q13506 487 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 BMPR2Q13873 1038 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 FRG1Q14331 258 aaKnown RBP6.25□□□□□ -1.41
VPS4B-205ENST00000591383 KRT33BQ14525 404 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 PLCL1Q15111 1095 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 KBTBD12Q3ZCT8 623 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 C14orf28Q4W4Y0 310 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 TEDDM1Q5T9Z0 273 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 Q6ZS46 218 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 KIAA0408Q6ZU52 694 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 C3orf62Q6ZUJ4 267 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 OTOAQ7RTW8 1153 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 C11orf96Q7Z7L8 435 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 SLC26A11Q86WA9 606 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 ZNF761Q86XN6 746 aaPredicted RBP6.25□□□□□ -1.41
VPS4B-205ENST00000591383 KIF18BQ86Y91 864 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 CNTN4Q8IWV2 1026 aa6.25□□□□□ -1.41
VPS4B-205ENST00000591383 CFAP206Q8IYR0 622 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms