RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 NAT9Q9BTE0 207 aa17.59■□□□□ 0.41
DDX39A-212ENST00000590260 ZC3H7BQ9UGR2 993 aaKnown RBP17.59■□□□□ 0.41
DDX39A-212ENST00000590260 LNPEPQ9UIQ6 1025 aa17.59■□□□□ 0.41
DDX39A-212ENST00000590260 VPS9D1Q9Y2B5 631 aa17.59■□□□□ 0.41
DDX39A-212ENST00000590260 MRPS18BQ9Y676 258 aaKnown RBP17.59■□□□□ 0.41
DDX39A-212ENST00000590260 A0A0J9YY10 115 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 E5RI56 91 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 PFDN6O15212 129 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 ERGP11308 486 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 PSMB5P28074 263 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 CDKN2DP55273 166 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 ARL4CP56559 192 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 PDIA2Q13087 525 aaKnown RBP17.58■□□□□ 0.4
DDX39A-212ENST00000590260 GPS2Q13227 327 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 COL9A2Q14055 689 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-212ENST00000590260 FASTKQ14296 549 aaKnown RBP17.58■□□□□ 0.4
DDX39A-212ENST00000590260 KIR2DS3Q14952 304 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 DEFB110Q30KQ9 67 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 LINC00303Q3SY05 128 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 LCN10Q6JVE6 187 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 FAM199XQ6PEV8 388 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-212ENST00000590260 C6orf15Q6UXA7 325 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-212ENST00000590260 CPNE9Q8IYJ1 553 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 ESX1Q8N693 406 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 FBXO36Q8NEA4 188 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 HMGCLL1Q8TB92 370 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 CALML6Q8TD86 181 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 LRRC39Q96DD0 335 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 FCRL4Q96PJ5 515 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 UBL7Q96S82 380 aaPredicted RBP17.58■□□□□ 0.4
DDX39A-212ENST00000590260 KLHL42Q9P2K6 505 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 PSAT1Q9Y617 370 aa17.58■□□□□ 0.4
DDX39A-212ENST00000590260 ISM1B1AKI9 464 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 ATXN7O15265 892 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-212ENST00000590260 NRP2O60462 931 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 RPN2P04844 631 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 FRG1Q14331 258 aaKnown RBP17.57■□□□□ 0.4
DDX39A-212ENST00000590260 FCRL6Q6DN72 434 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 ZDHHC24Q6UX98 284 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 PIWIL4Q7Z3Z4 852 aaKnown RBP17.57■□□□□ 0.4
DDX39A-212ENST00000590260 BPHLQ86WA6 291 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-212ENST00000590260 DNAJC22Q8N4W6 341 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 SKA2Q8WVK7 121 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-212ENST00000590260 DLG3Q92796 817 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 RAD51AP1Q96B01 352 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 SLC45A3Q96JT2 553 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 SEMA4CQ9C0C4 833 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 CHRNA10Q9GZZ6 450 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 SMYD2Q9NRG4 433 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 MOCS1Q9NZB8 636 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 WHRNQ9P202 907 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 CROTQ9UKG9 612 aa17.57■□□□□ 0.4
DDX39A-212ENST00000590260 TMEM150CB9EJG8 249 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 MYO1CO00159 1063 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 NKX2-8O15522 239 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 SCRG1O75711 98 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 PIAS1O75925 651 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 C1QL1O75973 258 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 C1QAP02745 245 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 PRB1P04280 392 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 MAGP20916 626 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 RORAP35398 523 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 RHDQ02161 417 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 CYP2A13Q16696 494 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 TMTC4Q5T4D3 741 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 ZNF517Q6ZMY9 492 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-212ENST00000590260 NEK10Q6ZWH5 1172 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 GALNT7Q86SF2 657 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 CT55Q8WUE5 264 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 ASB11Q8WXH4 323 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 INPP5DQ92835 1189 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 PKP4Q99569 1192 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 GPN2Q9H9Y4 310 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-212ENST00000590260 LHX9Q9NQ69 397 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 CDC23Q9UJX2 597 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 COMMD10Q9Y6G5 202 aa17.56■□□□□ 0.4
DDX39A-212ENST00000590260 GFYI3L273 518 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 ERVH48-1M5A8F1 160 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 TSPAN12O95859 305 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 MPC1LP0DKB6 136 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 MCM3P25205 808 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 CCNFP41002 786 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 ATP1A1-AS1Q5TC04 95 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 ZNF385CQ66K41 422 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-212ENST00000590260 KIAA0408Q6ZU52 694 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 TMEM126BQ8IUX1 230 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 LRRC56Q8IYG6 542 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-212ENST00000590260 EXD3Q8N9H8 876 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 OR2A1Q8NGT9 310 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 OR9A1PQ8NGU1 263 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 OR8K5Q8NH50 307 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 GSDMBQ8TAX9 411 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 TCTN2Q96GX1 697 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 OLFM1Q99784 485 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 SPRTNQ9H040 489 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-212ENST00000590260 SYNPO2LQ9H987 977 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 ADAMTS6Q9UKP5 1117 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 SLC39A10Q9ULF5 831 aa17.55■□□□□ 0.4
DDX39A-212ENST00000590260 PCDHB3Q9Y5E6 796 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms