RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 NTMT1Q9BV86 223 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 GSDMCQ9BYG8 508 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 MVB12BQ9H7P6 319 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 INTS7Q9NVH2 962 aaKnown RBP16.93■□□□□ 0.3
CXXC1-212ENST00000589940 SCHIP1Q9P0W5 487 aaPredicted RBP16.93■□□□□ 0.3
CXXC1-212ENST00000589940 DNAJC15Q9Y5T4 150 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 HEBP2Q9Y5Z4 205 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 SKAP2O75563 359 aaPredicted RBP16.93■□□□□ 0.3
CXXC1-212ENST00000589940 DCTN3O75935 186 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 OR4F21O95013 312 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 UROSP10746 265 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 MTHFD1P11586 935 aaKnown RBP16.93■□□□□ 0.3
CXXC1-212ENST00000589940 HSD17B2P37059 387 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 PNLIPRP1P54315 467 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 ARHGAP19Q14CB8 494 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 SLC9B1Q4ZJI4 515 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 MILR1Q7Z6M3 343 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 THOC6Q86W42 341 aaKnown RBP16.93■□□□□ 0.3
CXXC1-212ENST00000589940 SPATS2Q86XZ4 545 aaKnown RBP16.93■□□□□ 0.3
CXXC1-212ENST00000589940 PPFIBP2Q8ND30 876 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 OR4F6Q8NGB9 312 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 GAB3Q8WWW8 586 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 RILPQ96NA2 401 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 HEY2Q9UBP5 337 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 POLG2Q9UHN1 485 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 LNPEPQ9UIQ6 1025 aa16.93■□□□□ 0.3
CXXC1-212ENST00000589940 CEP192Q8TEP8 1941 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 A6NCN8 305 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 ERICH4A6NGS2 130 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 E7ENX8 843 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 EML2O95834 649 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 EBLN1P0CF75 366 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 ERGP11308 486 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 TBPL1P62380 186 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 TAP2Q03519 686 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 BTKQ06187 659 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 CDC16Q13042 620 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 CAPN13Q6MZZ7 669 aaPredicted RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 ZNF771Q7L3S4 317 aaPredicted RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 LRRC56Q8IYG6 542 aaPredicted RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 NUSAP1Q9BXS6 441 aaKnown RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 CAAP1Q9H8G2 361 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 SPATA7Q9P0W8 599 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 APOBEC3BQ9UH17 382 aaKnown RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 FBXO4Q9UKT5 387 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 PLAGL1Q9UM63 463 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 BCAT2O15382 392 aaPredicted RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 CSF2P04141 144 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 ENO1P06733 434 aaKnown RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 F3P13726 295 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 CTSEP14091 401 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 JUNDP17535 347 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 SERPINB3P29508 390 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 AFF3P51826 1226 aaKnown RBP16.92■□□□□ 0.3
CXXC1-212ENST00000589940 INHBCP55103 352 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 NXPH1P58417 271 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 IFT88Q13099 833 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 TUBB3Q13509 450 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 KRT33BQ14525 404 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 FAM219BQ5XKK7 198 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 TRPM8Q7Z2W7 1104 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 CDYL2Q8N8U2 506 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 TWIST2Q8WVJ9 160 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 PPP1R36Q96LQ0 422 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 IL17FQ96PD4 163 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 MENTQ9BUN1 341 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 SGPP1Q9BX95 441 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 MEAF6Q9HAF1 191 aa16.92■□□□□ 0.3
CXXC1-212ENST00000589940 KNL1Q8NG31 2342 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 VILLO15195 856 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 NME1P15531 152 aaKnown RBP16.91■□□□□ 0.3
CXXC1-212ENST00000589940 PMS2CLQ68D20 193 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 EFL1Q7Z2Z2 1120 aaKnown RBP16.91■□□□□ 0.3
CXXC1-212ENST00000589940 ALYREFQ86V81 257 aaKnown RBP16.91■□□□□ 0.3
CXXC1-212ENST00000589940 CHCHD4Q8N4Q1 142 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 MAELQ96JY0 434 aaKnown RBP16.91■□□□□ 0.3
CXXC1-212ENST00000589940 CAMK1GQ96NX5 476 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 LRRC37BQ96QE4 947 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 OR4K3Q96R72 315 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 WDR55Q9H6Y2 383 aaPredicted RBP16.91■□□□□ 0.3
CXXC1-212ENST00000589940 ACTR8Q9H981 624 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 TCF7L2Q9NQB0 619 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 ABCF3Q9NUQ8 709 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 TAAR2Q9P1P5 351 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 TIMM22Q9Y584 194 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 COLEC10Q9Y6Z7 277 aa16.91■□□□□ 0.3
CXXC1-212ENST00000589940 DNAH14Q0VDD8 3507 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 USP34Q70CQ2 3546 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 ZNF839A8K0R7 811 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 HGSO14964 777 aaPredicted RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CLDN9O95484 217 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CHEK2O96017 543 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CAPN1P07384 714 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 HGFP14210 728 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CCND1P24385 295 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 NDUFS1P28331 727 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 EPHA3P29320 983 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 SRSF5Q13243 272 aaKnown RBP16.9■□□□□ 0.3
CXXC1-212ENST00000589940 CYP2A13Q16696 494 aa16.9■□□□□ 0.3
CXXC1-212ENST00000589940 LYSMD4Q5XG99 296 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms