RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CCNG1P51959 295 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 PRKG2Q13237 762 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 CLCA4Q14CN2 919 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 ZXDCQ2QGD7 858 aaPredicted RBP21.63■■□□□ 1.05
ATG4D-209ENST00000588857 ABRAXAS1Q6UWZ7 409 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 ASCL5Q7RTU5 278 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 SYTL1Q8IYJ3 562 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 CLYBLQ8N0X4 340 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 GPBAR1Q8TDU6 330 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 PYCR2Q96C36 320 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 TNFRSF12AQ9NP84 129 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 DNAJC11Q9NVH1 559 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 LNPEPQ9UIQ6 1025 aa21.63■■□□□ 1.05
ATG4D-209ENST00000588857 ZFHX2Q9C0A1 2572 aaPredicted RBP21.62■■□□□ 1.05
ATG4D-209ENST00000588857 AZIN1O14977 448 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 BCAT2O15382 392 aaPredicted RBP21.62■■□□□ 1.05
ATG4D-209ENST00000588857 GFRA3O60609 400 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 FGF4P08620 206 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 JUNDP17535 347 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 AFF3P51826 1226 aaKnown RBP21.62■■□□□ 1.05
ATG4D-209ENST00000588857 NAE1Q13564 534 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 DUS1LQ6P1R4 473 aaKnown RBP21.62■■□□□ 1.05
ATG4D-209ENST00000588857 SYVN1Q86TM6 617 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 OR52B6Q8NGF0 335 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 ZNF480Q8WV37 535 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 TCEAL2Q9H3H9 227 aaPredicted RBP21.62■■□□□ 1.05
ATG4D-209ENST00000588857 STN1Q9H668 368 aaKnown RBP21.62■■□□□ 1.05
ATG4D-209ENST00000588857 MVB12BQ9H7P6 319 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 POLG2Q9UHN1 485 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 KLF15Q9UIH9 416 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 PCOLCE2Q9UKZ9 415 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 SLC22A14Q9Y267 594 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 VPS13AQ96RL7 3174 aa21.62■■□□□ 1.05
ATG4D-209ENST00000588857 TRPC5OSA6NMA1 111 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 OR52A4PA6NMU1 304 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 EBAG9O00559 213 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 OR7A17O14581 309 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 MTHFD1P11586 935 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 ITPKAP23677 461 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 DHPSP49366 369 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 C21orf59P57076 290 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 RPE65Q16518 533 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 LYSMD4Q5XG99 296 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 CLEC6AQ6EIG7 209 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 NRROSQ86YC3 692 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 RAB42Q8N4Z0 105 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 OR56A3Q8NH54 315 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 RILPQ96NA2 401 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 APOBEC3BQ9UH17 382 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 APOBEC2Q9Y235 224 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 COLEC10Q9Y6Z7 277 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 SDK1Q7Z5N4 2213 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 USP34Q70CQ2 3546 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 ZNF195O14628 629 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 VILLO15195 856 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 DIAPH2O60879 1101 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 LMNAP02545 664 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 HSD17B2P37059 387 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 PNLIPRP1P54315 467 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 SRSF5Q13243 272 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 PDCD2Q16342 344 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 CAPN13Q6MZZ7 669 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 EPGNQ6UW88 154 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 MAVSQ7Z434 540 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 MILR1Q7Z6M3 343 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 THOC6Q86W42 341 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 SPATS2Q86XZ4 545 aaKnown RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 KLHDC8AQ8IYD2 350 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 PPFIBP2Q8ND30 876 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 SCHIP1Q9P0W5 487 aaPredicted RBP21.61■■□□□ 1.05
ATG4D-209ENST00000588857 PLAGL1Q9UM63 463 aa21.61■■□□□ 1.05
ATG4D-209ENST00000588857 A0A1B0GTL3 188 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 ZNF839A8K0R7 811 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 KDM1AO60341 852 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 CSF2P04141 144 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 F3P13726 295 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 PRDX3P30048 256 aaKnown RBP21.6■■□□□ 1.05
ATG4D-209ENST00000588857 CSNK1EP49674 416 aaKnown RBP21.6■■□□□ 1.05
ATG4D-209ENST00000588857 IDH3AP50213 366 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 NXPH1P58417 271 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 GRB7Q14451 532 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 ARHGAP19Q14CB8 494 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 TEAD4Q15561 434 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 VWA5B1Q5TIE3 1220 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 KANK2Q63ZY3 851 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 PMS2CLQ68D20 193 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 TAF8Q7Z7C8 310 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 CDK15Q96Q40 435 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 NUF2Q9BZD4 464 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 INTS7Q9NVH2 962 aaKnown RBP21.6■■□□□ 1.05
ATG4D-209ENST00000588857 SPATA7Q9P0W8 599 aa21.6■■□□□ 1.05
ATG4D-209ENST00000588857 TNRC6BQ9UPQ9 1833 aaKnown RBP21.59■■□□□ 1.05
ATG4D-209ENST00000588857 SKAP2O75563 359 aaPredicted RBP21.59■■□□□ 1.05
ATG4D-209ENST00000588857 OR4F21O95013 312 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 EML2O95834 649 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 CHEK2O96017 543 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 UROSP10746 265 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 NME1P15531 152 aaKnown RBP21.59■■□□□ 1.05
ATG4D-209ENST00000588857 NDUFS1P28331 727 aa21.59■■□□□ 1.05
ATG4D-209ENST00000588857 ERVPABLB-1P60509 514 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms