RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 TRAPPC9Q96Q05 1148 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 GPR21Q99679 349 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 SLC30A3Q99726 388 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 AARSD1Q9BTE6 412 aaKnown RBP18.56■□□□□ 0.56
CIRBP-217ENST00000588230 RAB11FIP5Q9BXF6 653 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 FANCEQ9HB96 536 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 MED16Q9Y2X0 877 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 DHRS7Q9Y394 339 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 COL6A6A6NMZ7 2263 aa18.56■□□□□ 0.56
CIRBP-217ENST00000588230 GCN1Q92616 2671 aaKnown RBP18.56■□□□□ 0.56
CIRBP-217ENST00000588230 HELZ2Q9BYK8 2649 aaKnown RBP18.55■□□□□ 0.56
CIRBP-217ENST00000588230 KIF2AO00139 706 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-217ENST00000588230 RASGRF2O14827 1237 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 DLGAP3O95886 979 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 CUL1Q13616 776 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 FASTKD3Q14CZ7 662 aaKnown RBP18.55■□□□□ 0.56
CIRBP-217ENST00000588230 UGT3A1Q6NUS8 523 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 C6orf15Q6UXA7 325 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-217ENST00000588230 NEK10Q6ZWH5 1172 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 ZBED8Q8IZ13 594 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 ZSCAN1Q8NBB4 408 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 OR2L8Q8NGY9 312 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 OR8K5Q8NH50 307 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 GIMAP7Q8NHV1 300 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 KIAA1143Q96AT1 154 aaPredicted RBP18.55■□□□□ 0.56
CIRBP-217ENST00000588230 SLC22A18Q96BI1 424 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 NDNQ99608 321 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 MENTQ9BUN1 341 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 SEMA4CQ9C0C4 833 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 SYTL2Q9HCH5 934 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 GRHL1Q9NZI5 618 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 TRMT6Q9UJA5 497 aaKnown RBP18.55■□□□□ 0.56
CIRBP-217ENST00000588230 SPTBP11277 2137 aa18.55■□□□□ 0.56
CIRBP-217ENST00000588230 A0A0J9YY10 115 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 AHSGP02765 367 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 CATP04040 527 aaKnown RBP18.54■□□□□ 0.56
CIRBP-217ENST00000588230 ENO3P13929 434 aaPredicted RBP18.54■□□□□ 0.56
CIRBP-217ENST00000588230 GABRB3P28472 473 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 CAV1Q03135 178 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 CBLBQ13191 982 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 MAP7Q14244 749 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 FRG1Q14331 258 aaKnown RBP18.54■□□□□ 0.56
CIRBP-217ENST00000588230 SLC5A12Q1EHB4 618 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 CCSMST1Q4G0I0 132 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 PWWP2BQ6NUJ5 590 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 GALNT7Q86SF2 657 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 TAX1BP1Q86VP1 789 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 LMNTD1Q8N9Z9 388 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 LINC01555Q8NAE3 123 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 GALNT6Q8NCL4 622 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 PYROXD1Q8WU10 500 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 ZNF501Q96CX3 271 aaPredicted RBP18.54■□□□□ 0.56
CIRBP-217ENST00000588230 SAYSD1Q9NPB0 183 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 FAM114A2Q9NRY5 505 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 TAS2R13Q9NYV9 303 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 SLC17A6Q9P2U8 582 aa18.54■□□□□ 0.56
CIRBP-217ENST00000588230 TLN1Q9Y490 2541 aaKnown RBP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 EIF3HO15372 352 aaKnown RBP eCLIP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 TIAF1O95411 115 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 MT-ND3P03897 115 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 CBSLP0DN79 551 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 LIFP15018 202 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 PEBP1P30086 187 aaKnown RBP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 CBSP35520 551 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 SKIV2L2P42285 1042 aaKnown RBP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 PLTPP55058 493 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 MGAT5Q09328 741 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 ABHD18Q0P651 414 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 C8orf74Q6P047 294 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 TMEM126BQ8IUX1 230 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 PALM2Q8IXS6 379 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 C19orf47Q8N9M1 422 aaKnown RBP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 FLVCR1-AS1Q8TAF5 88 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 CD200R1Q8TD46 325 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 TCTN2Q96GX1 697 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 TWSG1Q9GZX9 223 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 GPN2Q9H9Y4 310 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.53■□□□□ 0.56
CIRBP-217ENST00000588230 ZFATQ9P243 1243 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 SERTAD3Q9UJW9 196 aa18.53■□□□□ 0.56
CIRBP-217ENST00000588230 SNRNP200O75643 2136 aaKnown RBP18.52■□□□□ 0.56
CIRBP-217ENST00000588230 ARHGEF33A8MVX0 844 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 TMEM150CB9EJG8 249 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 PSIP1O75475 530 aaKnown RBP18.52■□□□□ 0.56
CIRBP-217ENST00000588230 SCRG1O75711 98 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 NTRK1P04629 796 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 CCNYL3P0C7X3 344 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 MPC1LP0DKB6 136 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 MCM3P25205 808 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 LY6DQ14210 128 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 SF1Q15637 639 aaKnown RBP18.52■□□□□ 0.56
CIRBP-217ENST00000588230 LINC00303Q3SY05 128 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 TAF1BQ53T94 588 aaPredicted RBP18.52■□□□□ 0.56
CIRBP-217ENST00000588230 RBM20Q5T481 1227 aaKnown RBP18.52■□□□□ 0.56
CIRBP-217ENST00000588230 CDHR3Q6ZTQ4 885 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 CPNE9Q8IYJ1 553 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 ZNF843Q8N446 348 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 GPATCH11Q8N954 259 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 MNS1Q8NEH6 495 aa18.52■□□□□ 0.56
CIRBP-217ENST00000588230 OR9A1PQ8NGU1 263 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms