RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	DLG3	Q92796	817 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	ZUFSP	Q96AP4	578 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	FKBP10	Q96AY3	582 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	BARD1	Q99728	777 aa	Known RBP	12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	KLHL25	Q9H0H3	589 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	P2RY12	Q9H244	342 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	WDR54	Q9H977	334 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	TREX1	Q9NSU2	369 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	EURL	Q9NYK6	297 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	SLC2A6	Q9UGQ3	507 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	ZNF148	Q9UQR1	794 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	ICE1	Q9Y2F5	2266 aa		12.84	□□□□□ -0.35
PKN1-211	ENST00000588200	CELSR2	Q9HCU4	2923 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200		A0A0U1RQJ8	604 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	FITM1	A5D6W6	292 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	PRMT5	O14744	637 aa	Predicted RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	KPNA5	O15131	536 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	ZNF185	O15231	689 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	CNOT3	O75175	753 aa	Known RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	APOA4	P06727	396 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	RPS3	P23396	243 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	GRIA1	P42261	906 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	ADAR	P55265	1226 aa	Known RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	PRAME	P78395	509 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	SEMA3A	Q14563	771 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	NKAIN1	Q4KMZ8	207 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	CRB2	Q5IJ48	1285 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	PCID2	Q5JVF3	399 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	FHL5	Q5TD97	284 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	SEL1L2	Q5TEA6	688 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	FAM69B	Q5VUD6	431 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	SLC6A19	Q695T7	634 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	PPP1R21	Q6ZMI0	780 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	ZNF662	Q6ZS27	426 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	TRIM73	Q86UV7	250 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	OR6P1	Q8NGX9	317 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	ATG4A	Q8WYN0	398 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	NDC1	Q9BTX1	674 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	RAB11FIP5	Q9BXF6	653 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	TSGA10	Q9BZW7	698 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	IL22	Q9GZX6	179 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	ZNF552	Q9H707	407 aa	Predicted RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	RAB6B	Q9NRW1	208 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	TXLNG	Q9NUQ3	528 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	INTS7	Q9NVH2	962 aa	Known RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	IL1RAPL1	Q9NZN1	696 aa		12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	IFT80	Q9P2H3	777 aa	Predicted RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	TDRKH	Q9Y2W6	561 aa	Known RBP	12.83	□□□□□ -0.36
PKN1-211	ENST00000588200	DOPEY1	Q5JWR5	2465 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	WIPF3	A6NGB9	483 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	ISM1	B1AKI9	464 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200		E7EVH7	732 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	PEX12	O00623	359 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	RASGRF2	O14827	1237 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	CD3EAP	O15446	510 aa	Known RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	KRT86	O43790	486 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	SRPX2	O60687	465 aa	Predicted RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	APRT	P07741	180 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	UMOD	P07911	640 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	PIM1	P11309	404 aa	Predicted RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	FOLR3	P41439	243 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	NPY2R	P49146	381 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	CDK16	Q00536	496 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	HSPA14	Q0VDF9	509 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	BRD3	Q15059	726 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	SIX1	Q15475	284 aa	Predicted RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	TCTE1	Q5JU00	501 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	MEI1	Q5TIA1	1274 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	MLIP	Q5VWP3	458 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	OVCH1	Q7RTY7	1134 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	VRK3	Q8IV63	474 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	GALNT16	Q8N428	558 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	LMNTD1	Q8N9Z9	388 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	CLEC1A	Q8NC01	280 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	PPHLN1	Q8NEY8	458 aa	Known RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	RAD51AP1	Q96B01	352 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	PANX3	Q96QZ0	392 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	DESI2	Q9BSY9	194 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	SLC29A3	Q9BZD2	475 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	MRM3	Q9HC36	420 aa	Known RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	SLAMF7	Q9NQ25	335 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	CHRAC1	Q9NRG0	131 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	SLC22A11	Q9NSA0	550 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	CATSPERZ	Q9NTU4	200 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	P4HTM	Q9NXG6	502 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	NDOR1	Q9UHB4	597 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	GPN3	Q9UHW5	284 aa	Predicted RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	ANAPC5	Q9UJX4	755 aa		12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	PTRH2	Q9Y3E5	179 aa	Known RBP	12.82	□□□□□ -0.36
PKN1-211	ENST00000588200	DOCK10	Q96BY6	2186 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	CENPE	Q02224	2701 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	ITPR2	Q14571	2701 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	AGPS	O00116	658 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	DDAH2	O95865	285 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	IFNB1	P01574	187 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	ALPP	P05187	535 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	CTSB	P07858	339 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	MAG	P20916	626 aa		12.81	□□□□□ -0.36
PKN1-211	ENST00000588200	GNLY	P22749	145 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms