RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 HIST2H2BCQ6DN03 193 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 NAPRTQ6XQN6 538 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 Q6ZS92 163 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 TTLL10Q6ZVT0 673 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 PPP1R32Q7Z5V6 425 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 MCATQ8IVS2 390 aaKnown RBP13.22□□□□□ -0.29
RDH13-209ENST00000587721 DCUN1D3Q8IWE4 304 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 SLC22A15Q8IZD6 547 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 TAB3Q8N5C8 712 aaPredicted RBP13.22□□□□□ -0.29
RDH13-209ENST00000587721 LRRC57Q8N9N7 239 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 OR52K1Q8NGK4 314 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 OR6P1Q8NGX9 317 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 OR4L1Q8NH43 312 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 FLVCR1-AS1Q8TAF5 88 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 SLC35B2Q8TB61 432 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 HDAC10Q969S8 669 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 RAB11FIP5Q9BXF6 653 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 WDR54Q9H977 334 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 MRM3Q9HC36 420 aaKnown RBP13.22□□□□□ -0.29
RDH13-209ENST00000587721 CDC23Q9UJX2 597 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 NXT1Q9UKK6 140 aaKnown RBP13.22□□□□□ -0.29
RDH13-209ENST00000587721 RIMKLBQ9ULI2 386 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 PLAGL1Q9UM63 463 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 ESPL1Q14674 2120 aa13.22□□□□□ -0.29
RDH13-209ENST00000587721 SPTBN1Q01082 2364 aaKnown RBP13.22□□□□□ -0.29
RDH13-209ENST00000587721 USP9XQ93008 2570 aaPredicted RBP13.22□□□□□ -0.29
RDH13-209ENST00000587721 SPTAN1Q13813 2472 aaKnown RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 MED13Q9UHV7 2174 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 OR51F1A6NGY5 319 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 HCRTR1O43613 425 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 FKBP9O95302 570 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 GOT2P00505 430 aaKnown RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 TPBGLP0DKB5 382 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 PKLRP30613 574 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 FDFT1P37268 417 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 CSE1LP55060 971 aaKnown RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 GDF10P55107 478 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 KLF1Q13351 362 aaPredicted RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 SF1Q15637 639 aaKnown RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 FAM214AQ32MH5 1076 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 CCDC38Q502W7 563 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 AGAP7PQ5VUJ5 663 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 UNC5DQ6UXZ4 953 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 OVCH1Q7RTY7 1134 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 CFAP61Q8NHU2 1237 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 PEX13Q92968 403 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 AGAP4Q96P64 663 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 RANBP9Q96S59 729 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 WDR77Q9BQA1 342 aaPredicted RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 CARD6Q9BX69 1037 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.29
RDH13-209ENST00000587721 ERRFI1Q9UJM3 462 aaPredicted RBP13.21□□□□□ -0.29
RDH13-209ENST00000587721 WIPF3A6NGB9 483 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 KPNA5O15131 536 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 OR1I1O60431 355 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 SRPX2O60687 465 aaPredicted RBP13.2□□□□□ -0.3
RDH13-209ENST00000587721 UMODP07911 640 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 SPTBP11277 2137 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 CCR7P32248 378 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 TSTD2Q5T7W7 516 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 PRAMEF13Q5VWM6 474 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 OR13J1Q8NGT2 312 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 PPP4R1Q8TF05 950 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 UBE2Q2Q8WVN8 375 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 ZUFSPQ96AP4 578 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 PANX3Q96QZ0 392 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 SLC26A1Q9H2B4 701 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 EPS8L2Q9H6S3 715 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 CUTCQ9NTM9 273 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 ICE1Q9Y2F5 2266 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 COL12A1Q99715 3063 aa13.2□□□□□ -0.3
RDH13-209ENST00000587721 ENO4A6NNW6 628 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 DSCR3O14972 297 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 CNOT3O75175 753 aaKnown RBP13.19□□□□□ -0.3
RDH13-209ENST00000587721 GPC4O75487 556 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 SUN1O94901 812 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 ONECUT2O95948 504 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 LDLRP01130 860 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 IFNB1P01574 187 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 RNF224P0DH78 156 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 PEBP1P30086 187 aaKnown RBP13.19□□□□□ -0.3
RDH13-209ENST00000587721 TTPAP49638 278 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 PER3P56645 1201 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 NAA25Q14CX7 972 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 RBBP7Q16576 425 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 NKG7Q16617 165 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 PTRHD1Q6GMV3 140 aaKnown RBP13.19□□□□□ -0.3
RDH13-209ENST00000587721 ST6GALNAC3Q8NDV1 305 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 PPHLN1Q8NEY8 458 aaKnown RBP13.19□□□□□ -0.3
RDH13-209ENST00000587721 DNAJB14Q8TBM8 379 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 MAGEC3Q8TD91 643 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 SKA2Q8WVK7 121 aaPredicted RBP13.19□□□□□ -0.3
RDH13-209ENST00000587721 RAD51AP1Q96B01 352 aa13.19□□□□□ -0.3
RDH13-209ENST00000587721 FOPNLQ96NB1 174 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms