RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SLC39A1Q9NY26 324 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 SLC17A7Q9P2U7 560 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 COPG2Q9UBF2 871 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 KLHL3Q9UH77 587 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 CHKBQ9Y259 395 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 MAN2B2Q9Y2E5 1009 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 PRKAB1Q9Y478 270 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 PCDHGC4Q9Y5F7 938 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 USH1CQ9Y6N9 552 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 ANKRD12Q6UB98 2062 aa7.66□□□□□ -1.18
VMP1-204ENST00000587259 USP9YO00507 2555 aaPredicted RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 USP9XQ93008 2570 aaPredicted RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 IGHV1OR21-1A0A087WYE8 117 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 NPIPB15A6NHN6 443 aaPredicted RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 FOXO6A8MYZ6 492 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 TMEM114B3SHH9 223 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 F8W8V4 182 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 STX7O15400 261 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 CD3EAPO15446 510 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 HTRA2O43464 458 aaPredicted RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 FZD6O60353 706 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 AHSGP02765 367 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 PROCP04070 461 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 SERPINE1P05121 402 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 C2P06681 752 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 PYGLP06737 847 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 THRAP10827 490 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 MYCLP1P12525 358 aaPredicted RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 CTPS1P17812 591 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 CD9P21926 228 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 FOXN2P32314 431 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 HMGCLP35914 325 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 UQCRFS1P47985 274 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 STC1P52823 247 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 MLLT10P55197 1068 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 ADARP55265 1226 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 HNRNPH2P55795 449 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 BIRC2Q13490 618 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 TMEM164Q5U3C3 297 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 UGT3A1Q6NUS8 523 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 C16orf46Q6P387 395 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 BRICD5Q6PL45 260 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 Q6ZVL8 140 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 CRLF3Q8IUI8 442 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 WDR75Q8IWA0 830 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 HOMEZQ8IX15 550 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 RAVER1Q8IY67 606 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 GPATCH11Q8N954 259 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 HCAR2Q8TDS4 363 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 HDAC10Q969S8 669 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 TMEM159Q96B96 161 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 ECHDC3Q96DC8 303 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 ABHD17AQ96GS6 310 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 CDKN2AIPNLQ96HQ2 116 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 ELMO2Q96JJ3 720 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 DNAJC1Q96KC8 554 aaKnown RBP7.65□□□□□ -1.18
VMP1-204ENST00000587259 ZNF778Q96MU6 729 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 LYSMD1Q96S90 227 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 GPR63Q9BZJ6 419 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 NMRAL1Q9HBL8 299 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 SYTL2Q9HCH5 934 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 RAD18Q9NS91 495 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 MRGBPQ9NV56 204 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 KCNK4Q9NYG8 393 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 SLC39A10Q9ULF5 831 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 ZNF711Q9Y462 761 aa7.65□□□□□ -1.18
VMP1-204ENST00000587259 NBPF19A0A087WUL8 3843 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 A0A0J9YYE9 177 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 H3BMM5 538 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 TNFRSF10CO14798 259 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 HNRNPCL1O60812 293 aaKnown RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 NDUFS3O75489 264 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 ATP5HO75947 161 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 KLHL2O95198 593 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SOD1P00441 154 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 GOT2P00505 430 aaKnown RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 TRBC1P01850 177 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 RBP1P09455 135 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 FURINP09958 794 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SLC35E2BP0CK96 405 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 RNF224P0DH78 156 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 MYL2P10916 166 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SFTPCP11686 197 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 GP1BBP13224 206 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CPA3P15088 417 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CD46P15529 392 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 ZNF30P17039 623 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 ITGALP20701 1170 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 F8A1P23610 371 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CD82P27701 267 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CSTF2P33240 577 aaKnown RBP eCLIP7.64□□□□□ -1.19
VMP1-204ENST00000587259 CASRP41180 1078 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 ACTR1BP42025 376 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SKIV2L2P42285 1042 aaKnown RBP7.64□□□□□ -1.19
VMP1-204ENST00000587259 MAPK9P45984 424 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 CCR10P46092 362 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 SUOXP51687 545 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 ACTR1AP61163 376 aa7.64□□□□□ -1.19
VMP1-204ENST00000587259 PRR20EP86478 221 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms