RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 EIF3EP60228 445 aaKnown RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 GSTM4Q03013 218 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 CACNG1Q06432 222 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 TRIM14Q14142 442 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 ZNF169Q14929 603 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 KIR2DS3Q14952 304 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 AGAP7PQ5VUJ5 663 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 SP5Q6BEB4 398 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 FCRL6Q6DN72 434 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 AADACL2Q6P093 401 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 PACS1Q6VY07 963 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 HOOK3Q86VS8 718 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 VRK3Q8IV63 474 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 PARP9Q8IXQ6 854 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 LKAAEAR1Q8TD35 194 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 ELMO1Q92556 727 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 NACC2Q96BF6 587 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 CNDP1Q96KN2 507 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 AGAP4Q96P64 663 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 TRIM56Q9BRZ2 755 aaKnown RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 NDC1Q9BTX1 674 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 SOX17Q9H6I2 414 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 WDR54Q9H977 334 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 VPS37BQ9H9H4 285 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 ZNHIT6Q9NWK9 470 aaKnown RBP11.4□□□□□ -0.58
BRCA1-225ENST00000586385 CIDEBQ9UHD4 219 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 POLG2Q9UHN1 485 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 CDC23Q9UJX2 597 aa11.4□□□□□ -0.58
BRCA1-225ENST00000586385 DOCK10Q96BY6 2186 aa11.4□□□□□ -0.59
BRCA1-225ENST00000586385 SNRNP200O75643 2136 aaKnown RBP11.39□□□□□ -0.59
BRCA1-225ENST00000586385 MROH6A6NGR9 719 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 OR1I1O60431 355 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 NRP2O60462 931 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 METTL18O95568 372 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 ALBP02768 609 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 PTPN7P35236 360 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 GRIA3P42263 894 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 OR1D4P47884 311 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 KCNK10P57789 538 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 CDC16Q13042 620 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 POU6F1Q14863 301 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 B3GNTL1Q67FW5 361 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-225ENST00000586385 C11orf63Q6NUN7 778 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 FJX1Q86VR8 437 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 CDKL3Q8IVW4 592 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-225ENST00000586385 C2orf73Q8N5S3 287 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-225ENST00000586385 AMER2Q8N7J2 671 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 IL17FQ96PD4 163 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 TAAR6Q96RI8 345 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 LHPPQ9H008 270 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 CUTCQ9NTM9 273 aa11.39□□□□□ -0.59
BRCA1-225ENST00000586385 FEZ2Q9UHY8 353 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-225ENST00000586385 F8P00451 2351 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 SVILO95425 2214 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 MACROD2A1Z1Q3 448 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 CCDC162PA2VCL2 907 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 FITM1A5D6W6 292 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 PCDH17O14917 1159 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 DSCR3O14972 297 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 PRICKLE3O43900 615 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-225ENST00000586385 CTSVO60911 334 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 CCR7P32248 378 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 CTNNA1P35221 906 aaKnown RBP11.38□□□□□ -0.59
BRCA1-225ENST00000586385 NSG1P42857 185 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 RAB28P51157 221 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 PER3P56645 1201 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 TBX2Q13207 712 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-225ENST00000586385 MFAP5Q13361 173 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 PRPSAP1Q14558 356 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 ITIH4Q14624 930 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 TLR1Q15399 786 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 ZNF449Q6P9G9 518 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 DARS2Q6PI48 645 aaKnown RBP11.38□□□□□ -0.59
BRCA1-225ENST00000586385 LINC00696Q6ZRV3 163 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 TAX1BP1Q86VP1 789 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 MCEMP1Q8IX19 187 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 METTL27Q8N6F8 245 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-225ENST00000586385 STYXQ8WUJ0 223 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 PSMF1Q92530 271 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 ALG3Q92685 438 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 RELTQ969Z4 430 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 THOC3Q96J01 351 aaKnown RBP11.38□□□□□ -0.59
BRCA1-225ENST00000586385 OSBPL8Q9BZF1 889 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 IRAK4Q9NWZ3 460 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 IMPACTQ9P2X3 320 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 EFR3BQ9Y2G0 817 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 ZGRF1Q86YA3 2104 aa11.38□□□□□ -0.59
BRCA1-225ENST00000586385 KRT87PA6NCN2 255 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 RCCD1A6NED2 376 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 PRSS44E7EML9 344 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 GPC4O75487 556 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 WISP2O76076 250 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 FTH1P02794 183 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 MSNP26038 577 aaKnown RBP11.37□□□□□ -0.59
BRCA1-225ENST00000586385 SOX11P35716 441 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 MAGEA1P43355 309 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 ARSFP54793 590 aa11.37□□□□□ -0.59
BRCA1-225ENST00000586385 CSE1LP55060 971 aaKnown RBP11.37□□□□□ -0.59
BRCA1-225ENST00000586385 GDF10P55107 478 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms