RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	DEFB103A	P81534	67 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	BEX3	Q00994	111 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	TMEM187	Q14656	261 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	KIR2DS3	Q14952	304 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	TOMM20	Q15388	145 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	BEND3	Q5T5X7	828 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	C18orf63	Q68DL7	685 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	FAAH2	Q6GMR7	532 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	C1orf122	Q6ZSJ8	110 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	ANO5	Q75V66	913 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	KRT77	Q7Z794	578 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	ADGRA1	Q86SQ6	560 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	GPR180	Q86V85	440 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	ADSSL1	Q8N142	457 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	GPRC5A	Q8NFJ5	357 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	TBC1D20	Q96BZ9	403 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	PABPC5	Q96DU9	382 aa	Known RBP	2.57	□□□□□ -2
VAPA-208	ENST00000584796	ZSCAN31	Q96LW9	406 aa	Predicted RBP	2.57	□□□□□ -2
VAPA-208	ENST00000584796	IDI2	Q9BXS1	227 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	TRPV6	Q9H1D0	765 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	SLC28A3	Q9HAS3	691 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	FGF22	Q9HCT0	170 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	LTB4R2	Q9NPC1	389 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	ITM2C	Q9NQX7	267 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	TMOD2	Q9NZR1	351 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	MTUS1	Q9ULD2	1270 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	KLHL20	Q9Y2M5	609 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	CEPT1	Q9Y6K0	416 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	MYH6	P13533	1939 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	MIA3	Q5JRA6	1907 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	CELSR3	Q9NYQ7	3312 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	DOCK8	Q8NF50	2099 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	DMXL2	Q8TDJ6	3036 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	FREM2	Q5SZK8	3169 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796		A0A1W2PRG0	241 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	RRN3P2	A6NIE6	340 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	SLC15A5	A6NIM6	579 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	VCY	O14598	125 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	DCX	O43602	365 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	ENTPD3	O75355	529 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	BAIAP3	O94812	1187 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CSPG5	O95196	566 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CAVIN2	O95810	425 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CD4	P01730	458 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	VDR	P11473	427 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CAPN2	P17655	700 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	MAPK4	P31152	587 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	PSMC2	P35998	433 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	UBA7	P41226	1012 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	APOBEC1	P41238	236 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	CCR5	P51681	352 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	PSMC6	P62333	389 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	DYNLL1	P63167	89 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	MPP1	Q00013	466 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	NUCB1	Q02818	461 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	PRKG2	Q13237	762 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	TDG	Q13569	410 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	GPNMB	Q14956	572 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	ZNF239	Q16600	458 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	NFIL3	Q16649	462 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	MYLK3	Q32MK0	819 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	USP41	Q3LFD5	358 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CCDC184	Q52MB2	194 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	FAM133B	Q5BKY9	247 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	TCTE1	Q5JU00	501 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	C6orf141	Q5SZD1	244 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	LCE3A	Q5TA76	89 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	MFSD14C	Q5VZR4	134 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	SIGIRR	Q6IA17	410 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CYP26C1	Q6V0L0	522 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	PLEKHM3	Q6ZWE6	761 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	LRRC8D	Q7L1W4	858 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	RRM2B	Q7LG56	351 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	ATG9A	Q7Z3C6	839 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	ANKRD33	Q7Z3H0	272 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CACNA2D4	Q7Z3S7	1137 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	PIWIL4	Q7Z3Z4	852 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	HAPLN4	Q86UW8	402 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	MAP7D3	Q8IWC1	876 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	DNAAF4	Q8WXU2	420 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	RMDN1	Q96DB5	314 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	UBXN10	Q96LJ8	280 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	SERINC2	Q96SA4	455 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	SEC62	Q99442	399 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	BICC1	Q9H694	974 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	SMC4	Q9NTJ3	1288 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	ACSS1	Q9NUB1	689 aa	Predicted RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	BARHL2	Q9NY43	387 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CACNG5	Q9UF02	275 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	RASAL2	Q9UJF2	1139 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	FBXL2	Q9UKC9	423 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	NOL7	Q9UMY1	257 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	PA2G4	Q9UQ80	394 aa	Known RBP	2.56	□□□□□ -2
VAPA-208	ENST00000584796	TMEM98	Q9Y2Y6	226 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	MROH7-TTC4	A0A0A0MT08	1334 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	CFAP46	Q8IYW2	2715 aa		2.56	□□□□□ -2
VAPA-208	ENST00000584796	HECTD1	Q9ULT8	2610 aa		2.55	□□□□□ -2
VAPA-208	ENST00000584796	TEX13C	A0A0J9YWL9	993 aa		2.55	□□□□□ -2
VAPA-208	ENST00000584796		A0A1W2PP11	408 aa		2.55	□□□□□ -2
VAPA-208	ENST00000584796	OR5K3	A6NET4	321 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms