RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CNTRLQ7Z7A1 2325 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 DOCK10Q96BY6 2186 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PIPSLA2A3N6 862 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 CCDC78A2IDD5 438 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 CCDC162PA2VCL2 907 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 SLC9B1P1A6NJY1 282 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 BTN3A1O00481 513 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 KLK3P07288 261 aaPredicted RBP10.76□□□□□ -0.69
CCDC47-206ENST00000584112 ADRA1DP25100 572 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 VARSP26640 1264 aaKnown RBP10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PTPN4P29074 926 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PRDX3P30048 256 aaKnown RBP10.76□□□□□ -0.69
CCDC47-206ENST00000584112 SHMT2P34897 504 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PRAMEP78395 509 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 TLE4Q04727 773 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 SYTL3Q4VX76 610 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 TSTD2Q5T7W7 516 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 MEI1Q5TIA1 1274 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 C4orf22Q6V702 233 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PHC3Q8NDX5 983 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PPHLN1Q8NEY8 458 aaKnown RBP10.76□□□□□ -0.69
CCDC47-206ENST00000584112 OR13J1Q8NGT2 312 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 MAIP1Q8WWC4 291 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 C1orf54Q8WWF1 131 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 HDAC10Q969S8 669 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 LRFN5Q96NI6 719 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 HGH1Q9BTY7 390 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 TSSK1BQ9BXA7 367 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 TLR10Q9BXR5 811 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 PITPNM3Q9BZ71 974 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 ACTL8Q9H568 366 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 POLG2Q9UHN1 485 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 ANAPC5Q9UJX4 755 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 ASF1AQ9Y294 204 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 ZKSCAN5Q9Y2L8 839 aa10.76□□□□□ -0.69
CCDC47-206ENST00000584112 OR51F1A6NGY5 319 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 AP3B1O00203 1094 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 BTN3A3O00478 584 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 GOT2P00505 430 aaKnown RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 APRTP07741 180 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 CCDC175P0C221 793 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ST6GAL1P15907 406 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 CYP2A7P20853 494 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ACVR1Q04771 509 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 PRKG2Q13237 762 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 SNX1Q13596 522 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 CCNG2Q16589 344 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ZNF630Q2M218 657 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 FASTKD1Q53R41 847 aaKnown RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 VWA2Q5GFL6 755 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 AARS2Q5JTZ9 985 aaKnown RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 DRICH1Q6PGQ1 229 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 FBXO38Q6PIJ6 1188 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ZNF662Q6ZS27 426 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 SYVN1Q86TM6 617 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 TBC1D21Q8IYX1 336 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ADGRF3Q8IZF5 1079 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 OR6P1Q8NGX9 317 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 OR4L1Q8NH43 312 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 OR5K2Q8NHB8 316 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 NUDT8Q8WV74 236 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ITLN2Q8WWU7 325 aaPredicted RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 THAP4Q8WY91 577 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 MR1Q95460 341 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 CLIP3Q96DZ5 547 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 PPM1MQ96MI6 270 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 MLXIPLQ9NP71 852 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 EIF2B3Q9NR50 452 aaKnown RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 SEMA3GQ9NS98 782 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ACTR10Q9NZ32 417 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 SERTAD3Q9UJW9 196 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 FARSAQ9Y285 508 aaKnown RBP10.75□□□□□ -0.69
CCDC47-206ENST00000584112 TCAF1Q9Y4C2 921 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 PRSS21Q9Y6M0 314 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 TLN2Q9Y4G6 2542 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 ANK2Q01484 3957 aa10.75□□□□□ -0.69
CCDC47-206ENST00000584112 SLC5A10A0PJK1 596 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 TMEM150CB9EJG8 249 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 NRDCO43847 1150 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 RPN2P04844 631 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 HBQ1P09105 142 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 ACADLP28330 430 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 CCL11P51671 97 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 GPS2Q13227 327 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 BRD3Q15059 726 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 UGT8Q16880 541 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 PCID2Q5JVF3 399 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 IZUMO3Q5VZ72 239 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 FAM199XQ6PEV8 388 aaPredicted RBP10.74□□□□□ -0.69
CCDC47-206ENST00000584112 SPESP1Q6UW49 350 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 MICALCLQ6ZW33 695 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 APLFQ8IW19 511 aaPredicted RBP10.74□□□□□ -0.69
CCDC47-206ENST00000584112 DSELQ8IZU8 1212 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 TRIM58Q8NG06 486 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 OR5AR1Q8NGP9 310 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 N4BP2L2Q92802 583 aaPredicted RBP10.74□□□□□ -0.69
CCDC47-206ENST00000584112 PNPLA2Q96AD5 504 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 ARSGQ96EG1 525 aa10.74□□□□□ -0.69
CCDC47-206ENST00000584112 TRAPPC9Q96Q05 1148 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms