RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SPATA13Q96N96 652 aa15.51■□□□□ 0.07
SREBF1-221ENST00000583080 SOX17Q9H6I2 414 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-221ENST00000583080 ARNT2Q9HBZ2 717 aa15.51■□□□□ 0.07
SREBF1-221ENST00000583080 NLE1Q9NVX2 485 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-221ENST00000583080 PIH1D1Q9NWS0 290 aaKnown RBP15.51■□□□□ 0.07
SREBF1-221ENST00000583080 CIDEBQ9UHD4 219 aa15.51■□□□□ 0.07
SREBF1-221ENST00000583080 POLG2Q9UHN1 485 aa15.51■□□□□ 0.07
SREBF1-221ENST00000583080 SLC5A10A0PJK1 596 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 PJA2O43164 708 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 AP2A1O95782 977 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 TPM3P06753 285 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 RBP3P10745 1247 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 PKLRP30613 574 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 EIF3EP60228 445 aaKnown RBP15.5■□□□□ 0.07
SREBF1-221ENST00000583080 CACNG1Q06432 222 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 NAA30Q147X3 362 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-221ENST00000583080 KIR2DS3Q14952 304 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 TUBB8Q3ZCM7 444 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 SYTL3Q4VX76 610 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 IRAK1BP1Q5VVH5 260 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 SP5Q6BEB4 398 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-221ENST00000583080 LINC00696Q6ZRV3 163 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 OVCH1Q7RTY7 1134 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 TAX1BP1Q86VP1 789 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 MCATQ8IVS2 390 aaKnown RBP15.5■□□□□ 0.07
SREBF1-221ENST00000583080 MCEMP1Q8IX19 187 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 KLHDC8BQ8IXV7 354 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 LINC01555Q8NAE3 123 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 CATSPER1Q8NEC5 780 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 DLG3Q92796 817 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 CDKN2AIPNLQ96HQ2 116 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 THOC3Q96J01 351 aaKnown RBP15.5■□□□□ 0.07
SREBF1-221ENST00000583080 LHPPQ9H008 270 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 WDR54Q9H977 334 aa15.5■□□□□ 0.07
SREBF1-221ENST00000583080 F8P00451 2351 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 ONECUT2O95948 504 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 STSP08842 583 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 GRNP28799 593 aaKnown RBP15.49■□□□□ 0.07
SREBF1-221ENST00000583080 NSG1P42857 185 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 CSE1LP55060 971 aaKnown RBP15.49■□□□□ 0.07
SREBF1-221ENST00000583080 POU6F1Q14863 301 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 TLR1Q15399 786 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 RBBP7Q16576 425 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 KCTD11Q693B1 232 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 FAM180AQ6UWF9 173 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 VSTM4Q8IW00 320 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 C2orf73Q8N5S3 287 aaPredicted RBP15.49■□□□□ 0.07
SREBF1-221ENST00000583080 OR11G2Q8NGC1 345 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 NACC2Q96BF6 587 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 IL17FQ96PD4 163 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 MENTQ9BUN1 341 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 SLC26A1Q9H2B4 701 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 EPS8L2Q9H6S3 715 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 MRM3Q9HC36 420 aaKnown RBP15.49■□□□□ 0.07
SREBF1-221ENST00000583080 CUTCQ9NTM9 273 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 OLAHQ9NV23 265 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 IMPACTQ9P2X3 320 aa15.49■□□□□ 0.07
SREBF1-221ENST00000583080 FEZ2Q9UHY8 353 aaPredicted RBP15.49■□□□□ 0.07
SREBF1-221ENST00000583080 CSMD2Q7Z408 3487 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 C2CD3Q4AC94 2353 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 DSCR3O14972 297 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 STK10O94804 968 aaKnown RBP15.48■□□□□ 0.07
SREBF1-221ENST00000583080 KLHL18O94889 574 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 ALBP02768 609 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 FTH1P02794 183 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 FOXN2P32314 431 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 GRIA3P42263 894 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 OR1D4P47884 311 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 RAB28P51157 221 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 ARSFP54793 590 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 KCNK10P57789 538 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 ITIH4Q14624 930 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 FCRL6Q6DN72 434 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 C11orf63Q6NUN7 778 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 DARS2Q6PI48 645 aaKnown RBP15.48■□□□□ 0.07
SREBF1-221ENST00000583080 PACS1Q6VY07 963 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 TMTC1Q8IUR5 882 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 VRK3Q8IV63 474 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 COG1Q8WTW3 980 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 MOCOSQ96EN8 888 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
SREBF1-221ENST00000583080 MAU2Q9Y6X3 613 aa15.48■□□□□ 0.07
SREBF1-221ENST00000583080 PDZD2O15018 2839 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 OR1I1O60431 355 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 JRKO75564 520 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 MED26O95402 600 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 MSNP26038 577 aaKnown RBP15.47■□□□□ 0.07
SREBF1-221ENST00000583080 CTNNA2P26232 953 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 TDGF1P3P51864 188 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 MFAP5Q13361 173 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 GRB7Q14451 532 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 AADACL2Q6P093 401 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 ISLR2Q6UXK2 745 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 BCORP1Q8N888 145 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 LKAAEAR1Q8TD35 194 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 STYXQ8WUJ0 223 aa15.47■□□□□ 0.07
SREBF1-221ENST00000583080 MAGEB10Q96LZ2 347 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-221ENST00000583080 TRIM56Q9BRZ2 755 aaKnown RBP15.47■□□□□ 0.07
SREBF1-221ENST00000583080 OSBPL8Q9BZF1 889 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms