RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 C1orf189Q5VU69 101 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 YOD1Q5VVQ6 348 aaPredicted RBP13.21□□□□□ -0.29
GGA3-208ENST00000579743 MRNIPQ6NTE8 343 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 OTOAQ7RTW8 1153 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 DNAJC22Q8N4W6 341 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 TTC29Q8NA56 475 aaPredicted RBP13.21□□□□□ -0.29
GGA3-208ENST00000579743 FDCSPQ8NFU4 85 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 OR2Y1Q8NGV0 311 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 PNPLA2Q96AD5 504 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 SPHK1Q9NYA1 384 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 EURLQ9NYK6 297 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 IL1RAPL1Q9NZN1 696 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 SLC2A6Q9UGQ3 507 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 PLAGL1Q9UM63 463 aa13.21□□□□□ -0.29
GGA3-208ENST00000579743 H3BMM5 538 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 GPC4O75487 556 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 CBSLP0DN79 551 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 AOAHP28039 575 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 CBSP35520 551 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 SESN2P58004 480 aaPredicted RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 GRM7Q14831 915 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 INPP5JQ15735 1006 aaPredicted RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 RNF187Q5TA31 235 aaPredicted RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 JMJD6Q6NYC1 403 aaPredicted RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 DRICH1Q6PGQ1 229 aaPredicted RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 MRGPREQ86SM8 312 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 MCATQ8IVS2 390 aaKnown RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 ZADH2Q8N4Q0 377 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 ZUFSPQ96AP4 578 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 GBP5Q96PP8 586 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 SMAD5Q99717 465 aaKnown RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 ATP13A2Q9NQ11 1180 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 CHRAC1Q9NRG0 131 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 DHCR7Q9UBM7 475 aaKnown RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 NXT1Q9UKK6 140 aaKnown RBP13.2□□□□□ -0.3
GGA3-208ENST00000579743 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 MAP4K5Q9Y4K4 846 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 FAM169AQ9Y6X4 670 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 BOD1L1Q8NFC6 3051 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
GGA3-208ENST00000579743 SPTBP11277 2137 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 A0A1B0GX78 115 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 CLEC18AA5D8T8 446 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 KLF7O75840 302 aaPredicted RBP13.19□□□□□ -0.3
GGA3-208ENST00000579743 SLCO2B1O94956 709 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 CCDC175P0C221 793 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 PAMP19021 973 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 MAGP20916 626 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 GRIA1P42261 906 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 SRSF1Q07955 248 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGA3-208ENST00000579743 MYBPC3Q14896 1274 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 ZIC1Q15915 447 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 DCAF10Q5QP82 559 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 MEI1Q5TIA1 1274 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 ZNF385CQ66K41 422 aaPredicted RBP13.19□□□□□ -0.3
GGA3-208ENST00000579743 FIGLAQ6QHK4 219 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 CLEC18BQ6UXF7 455 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 TTLL10Q6ZVT0 673 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 ZNF534Q76KX8 674 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 IQCKQ8N0W5 287 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 GALNT16Q8N428 558 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 CLEC18CQ8NCF0 446 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 FKBP10Q96AY3 582 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 ZNF778Q96MU6 729 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 NRTNQ99748 197 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 NUDT9Q9BW91 350 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
GGA3-208ENST00000579743 P4HTMQ9NXG6 502 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 UTP6Q9NYH9 597 aaKnown RBP13.19□□□□□ -0.3
GGA3-208ENST00000579743 TTC7AQ9ULT0 858 aaPredicted RBP13.19□□□□□ -0.3
GGA3-208ENST00000579743 SEC16AO15027 2179 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 HECTD1Q9ULT8 2610 aa13.19□□□□□ -0.3
GGA3-208ENST00000579743 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 DOPEY2Q9Y3R5 2298 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 IQCF5A8MTL0 148 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 TARM1B6A8C7 271 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 SRPX2O60687 465 aaPredicted RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 SORBS2O94875 1100 aaKnown RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 ALBP02768 609 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 TPBGLP0DKB5 382 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 GNLYP22749 145 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 RPS3P23396 243 aaKnown RBP eCLIP13.18□□□□□ -0.3
GGA3-208ENST00000579743 RPL22P35268 128 aaKnown RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 GABRA4P48169 554 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 AIMP2Q13155 320 aaKnown RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 ELOAQ14241 798 aaKnown RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 ARMC3Q5W041 872 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 FLVCR1-AS1Q8TAF5 88 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 TCF12Q99081 682 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 SELENOSQ9BQE4 189 aa13.18□□□□□ -0.3
GGA3-208ENST00000579743 ILKAPQ9H0C8 392 aaPredicted RBP13.18□□□□□ -0.3
GGA3-208ENST00000579743 WDR54Q9H977 334 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms