RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 FBXO6Q9NRD1 293 aaPredicted RBP14.32□□□□□ -0.12
SS18-212ENST00000579061 INTS7Q9NVH2 962 aaKnown RBP14.32□□□□□ -0.12
SS18-212ENST00000579061 SPATA7Q9P0W8 599 aa14.32□□□□□ -0.12
SS18-212ENST00000579061 NFS1Q9Y697 457 aa14.32□□□□□ -0.12
SS18-212ENST00000579061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.32□□□□□ -0.124e-6■■■□□ 17.6
SS18-212ENST00000579061 E7EQ34 232 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 FANCGO15287 622 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 PRB1P04280 392 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 CYP2A7P20853 494 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 CLCN7P51798 805 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 GPS2Q13227 327 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 ZIC1Q15915 447 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 MSS51Q4VC12 460 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 HSP90AA5PQ58FG0 334 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 HIBCHQ6NVY1 386 aaPredicted RBP14.31□□□□□ -0.12
SS18-212ENST00000579061 TRIM73Q86UV7 250 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 CNTN4Q8IWV2 1026 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 GPR135Q8IZ08 494 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 DSELQ8IZU8 1212 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 EXD3Q8N9H8 876 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 SLC38A9Q8NBW4 561 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 N4BP2L2Q92802 583 aaPredicted RBP14.31□□□□□ -0.12
SS18-212ENST00000579061 RNF31Q96EP0 1072 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 SNF8Q96H20 258 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 DPH2Q9BQC3 489 aaPredicted RBP14.31□□□□□ -0.12
SS18-212ENST00000579061 SEMA4CQ9C0C4 833 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 ACTR5Q9H9F9 607 aaPredicted RBP14.31□□□□□ -0.12
SS18-212ENST00000579061 FAM60AQ9NP50 221 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 GALPQ9UBC7 116 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 TUBD1Q9UJT1 453 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 DHRS7Q9Y394 339 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 MRPS18BQ9Y676 258 aaKnown RBP14.31□□□□□ -0.12
SS18-212ENST00000579061 AP1M2Q9Y6Q5 423 aa14.31□□□□□ -0.12
SS18-212ENST00000579061 FER1L5A0AVI2 2057 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 CFAP46Q8IYW2 2715 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 H3BMH7 237 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 MEN1O00255 615 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 EIF3FO00303 357 aaPredicted RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 TTI1O43156 1089 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 PRICKLE3O43900 615 aaPredicted RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 KATNA1O75449 491 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 PSIP1O75475 530 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 CREG1O75629 220 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 SEC31AO94979 1220 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 RAB40ALP0C0E4 278 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 MPC1LP0DKB6 136 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 CBSLP0DN79 551 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 ENO3P13929 434 aaPredicted RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 OAS2P29728 719 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 RORAP35398 523 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 CBSP35520 551 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 CCR10P46092 362 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 BDKRB1P46663 353 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 RPS15P62841 145 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 CYP2A13Q16696 494 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 KLHL38Q2WGJ6 581 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 BBS9Q3SYG4 887 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 ACSBG2Q5FVE4 666 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 ZNF549Q6P9A3 640 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 CNSTQ6PJW8 725 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 KIAA0408Q6ZU52 694 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 GALNT7Q86SF2 657 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 DNAJC22Q8N4W6 341 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 FBXO15Q8NCQ5 510 aaPredicted RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 C2CD4AQ8NCU7 369 aaPredicted RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 INPP5DQ92835 1189 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 MR1Q95460 341 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 FAM136AQ96C01 138 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 IL17FQ96PD4 163 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 AKIRIN1Q9H9L7 192 aaPredicted RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 IARS2Q9NSE4 1012 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 GEMIN8Q9NWZ8 242 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 MED16Q9Y2X0 877 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 KLK4Q9Y5K2 254 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 HEATR5BQ9P2D3 2071 aa14.3□□□□□ -0.12
SS18-212ENST00000579061 TLN1Q9Y490 2541 aaKnown RBP14.3□□□□□ -0.12
SS18-212ENST00000579061 TARM1B6A8C7 271 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 BANF1O75531 89 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 HAUS5O94927 633 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 CATP04040 527 aaKnown RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 PRKAR1AP10644 381 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ERGP11308 486 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 MAGP20916 626 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 PTPN4P29074 926 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 HSD17B2P37059 387 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ITGA8P53708 1063 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ARL4CP56559 192 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ETF1P62495 437 aaKnown RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 MPP1Q00013 466 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 CBLBQ13191 982 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 ARHGAP19Q14CB8 494 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
SS18-212ENST00000579061 HIF1AQ16665 826 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 CCSMST1Q4G0I0 132 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 PRAMEF17Q5VTA0 474 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 UGT3A1Q6NUS8 523 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 C16orf46Q6P387 395 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 TLDC1Q6P9B6 456 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 FIGLAQ6QHK4 219 aa14.29□□□□□ -0.12
SS18-212ENST00000579061 SYVN1Q86TM6 617 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms