RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CPNE3O75131 537 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 AHSGP02765 367 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 HBQ1P09105 142 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 HIST1H2AGP0C0S8 130 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CBSLP0DN79 551 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ENO3P13929 434 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ST6GAL1P15907 406 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF28P17035 718 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 HIST1H2ADP20671 130 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 AGXTP21549 392 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ALAS2P22557 587 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 MCM3P25205 808 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ATP5DP30049 168 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 RPA3P35244 121 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CBSP35520 551 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 HSD17B2P37059 387 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 GRIA3P42263 894 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 BDKRB1P46663 353 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 RPL21P46778 160 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CLCN7P51798 805 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 SLC12A2P55011 1212 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ITGA1P56199 1179 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 IL2P60568 153 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 MPP1Q00013 466 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 MC1RQ01726 317 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CAV1Q03135 178 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 MGAT5Q09328 741 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 SRSF6Q13247 344 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 PDAP1Q13442 181 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CUL1Q13616 776 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 KYNUQ16719 465 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 SLC5A12Q1EHB4 618 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ACSBG2Q5FVE4 666 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 C8orf74Q6P047 294 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 FAM199XQ6PEV8 388 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CAPN12Q6ZSI9 719 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 KIAA0408Q6ZU52 694 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 TIPARPQ7Z3E1 657 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 IGDCC3Q8IVU1 814 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 MYO1HQ8N1T3 1032 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 AGGF1Q8N302 714 aaeCLIP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 C19orf47Q8N9M1 422 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 C2CD4AQ8NCU7 369 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 OR9A1PQ8NGU1 263 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 OR2L8Q8NGY9 312 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 MCOLN3Q8TDD5 553 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 CDKL2Q92772 493 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ALKBH8Q96BT7 664 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 HIST1H2AHQ96KK5 128 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 TRAPPC9Q96Q05 1148 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 OR2A14Q96R47 310 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 NDNQ99608 321 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 GPR21Q99679 349 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 HIST1H2AJQ99878 128 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 H2AFJQ9BTM1 129 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 NDC1Q9BTX1 674 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ACAT2Q9BWD1 397 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 TRIM54Q9BYV2 358 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 PITPNM3Q9BZ71 974 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ACTR5Q9H9F9 607 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 SAYSD1Q9NPB0 183 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 TXLNGQ9NUQ3 528 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 UTP6Q9NYH9 597 aaKnown RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 WHRNQ9P202 907 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 SEMA5BQ9P283 1151 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 PLCL2Q9UPR0 1127 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 BTRCQ9Y297 605 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 KLHL20Q9Y2M5 609 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 DHRS7Q9Y394 339 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 TMEM184BQ9Y519 407 aaPredicted RBP6.33□□□□□ -1.4
TRAF4-213ENST00000578917 PCDHGA4Q9Y5G9 962 aa6.33□□□□□ -1.4
TRAF4-213ENST00000578917 ERVH48-1M5A8F1 160 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 KIF2AO00139 706 aaPredicted RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 FANCGO15287 622 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 NKX2-8O15522 239 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF749O43361 778 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 RAD51CO43502 376 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TIAF1O95411 115 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MATN4O95460 622 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TUBB4AP04350 444 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ITGB2P05107 769 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 EIF2S1P05198 315 aaKnown RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TPBGLP0DKB5 382 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MAGP20916 626 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CMPK1P30085 196 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 PKLRP30613 574 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 STAT5AP42229 794 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 SLC7A5Q01650 507 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MAP7Q14244 749 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ERV3-1Q14264 604 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 WHAMMP3Q1A5X7 153 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CCSMST1Q4G0I0 132 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ZC3H12BQ5HYM0 836 aaKnown RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TEDDM1Q5T9Z0 273 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 MLIPQ5VWP3 458 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 LRRC8EQ6NSJ5 796 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 ZNF549Q6P9A3 640 aa6.32□□□□□ -1.4
TRAF4-213ENST00000578917 TRMT10BQ6PF06 316 aaKnown RBP6.32□□□□□ -1.4
TRAF4-213ENST00000578917 CDHR3Q6ZTQ4 885 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms