RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	SLC5A12	Q1EHB4	618 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TTLL9	Q3SXZ7	439 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	STEAP4	Q687X5	459 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PWWP2B	Q6NUJ5	590 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ZNF549	Q6P9A3	640 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	FBXO38	Q6PIJ6	1188 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	UNC5B	Q8IZJ1	945 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	RAB42	Q8N4Z0	105 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	EXD3	Q8N9H8	876 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	LINC01555	Q8NAE3	123 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	OR2L8	Q8NGY9	312 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	HMGCLL1	Q8TB92	370 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SKA2	Q8WVK7	121 aa	Predicted RBP	13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TCTN2	Q96GX1	697 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ELMO2	Q96JJ3	720 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SLC45A3	Q96JT2	553 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ERP44	Q9BS26	406 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PLAC1	Q9HBJ0	212 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	IARS2	Q9NSE4	1012 aa	Known RBP	13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	STARD5	Q9NSY2	213 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SPHK1	Q9NYA1	384 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	WHRN	Q9P202	907 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ANKMY1	Q9P2S6	941 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GALP	Q9UBC7	116 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PLAGL1	Q9UM63	463 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	MED16	Q9Y2X0	877 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501	DHRS7	Q9Y394	339 aa		13.18	□□□□□ -0.3
CSNK1D-208	ENST00000578501		A0A0J9YY10	115 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	LOC101059948	A0A1B0GTJ6	334 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501		E7ESA3	106 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	EIF3F	O00303	357 aa	Predicted RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SUV39H1	O43463	412 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PSIP1	O75475	530 aa	Known RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	FKBP9	O95302	570 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TIAF1	O95411	115 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ITGB2	P05107	769 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CCNYL3	P0C7X3	344 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CBSL	P0DN79	551 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ENO3	P13929	434 aa	Predicted RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PEBP1	P30086	187 aa	Known RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CBS	P35520	551 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	MPP1	Q00013	466 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GPR19	Q15760	415 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	KLHL38	Q2WGJ6	581 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CRTC2	Q53ET0	693 aa	Predicted RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ACSBG2	Q5FVE4	666 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CNST	Q6PJW8	725 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GALNT6	Q8NCL4	622 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	INPP5D	Q92835	1189 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	FAM136A	Q96C01	138 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CERS2	Q96G23	380 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PWWP2A	Q96N64	755 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	LRFN5	Q96NI6	719 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	WDR83	Q9BRX9	315 aa	Known RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	AARSD1	Q9BTE6	412 aa	Known RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SLC12A9	Q9BXP2	914 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TRIM31	Q9BZY9	425 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	LNPEP	Q9UIQ6	1025 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PADI1	Q9ULC6	663 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SLC39A10	Q9ULF5	831 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SNX24	Q9Y343	169 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PCDHB3	Q9Y5E6	796 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	NFS1	Q9Y697	457 aa		13.17	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ISM1	B1AKI9	464 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	MYO1C	O00159	1063 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	RAD51C	O43502	376 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CPNE3	O75131	537 aa	Known RBP	13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	AHSG	P02765	367 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GP1BB	P13224	206 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PVR	P15151	417 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GABRB3	P28472	473 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	HSD17B2	P37059	387 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SKIV2L2	P42285	1042 aa	Known RBP	13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CYP2A13	Q16696	494 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TEDDM1	Q5T9Z0	273 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	DUPD1	Q68J44	220 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	UGT3A1	Q6NUS8	523 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CDHR3	Q6ZTQ4	885 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TMEM126B	Q8IUX1	230 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	C19orf47	Q8N9M1	422 aa	Known RBP	13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GIMAP7	Q8NHV1	300 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SLC30A3	Q99726	388 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	LHX9	Q9NQ69	397 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	FAM114A2	Q9NRY5	505 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SPATA7	Q9P0W8	599 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SERTAD3	Q9UJW9	196 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CORO1C	Q9ULV4	474 aa	Predicted RBP	13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CHMP2B	Q9UQN3	213 aa		13.16	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ZNF891	A8MT65	544 aa	Predicted RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	C21orf140	B9A014	251 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TMEM150C	B9EJG8	249 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GFY	I3L273	518 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PRICKLE3	O43900	615 aa	Predicted RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	VPS26A	O75436	327 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	SCRG1	O75711	98 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CAT	P04040	527 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 829.5 ms