RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 B4GAT1O43505 415 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 GMNNO75496 209 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 PPM1AP35813 382 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 LRRC26Q2I0M4 334 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 RUNDC3AQ59EK9 446 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 ARSIQ5FYB1 569 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 PRR23BQ6ZRT6 265 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 LPCAT2Q7L5N7 544 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 PHF12Q96QT6 1004 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 EBPLQ9BY08 206 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 PPT2Q9UMR5 302 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 LTBP2Q14767 1821 aa17.11■□□□□ 0.33
ERBB2-205ENST00000578199 A0A1W2PQ67 120 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 ELOVL7A1L3X0 281 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 ZBBXA8MT70 800 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 LEFTY1O75610 366 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 PRKD3O94806 890 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 PTPN5P54829 565 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 NTHL1P78549 312 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 DYNC1I2Q13409 638 aaKnown RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 LY6G5CQ5SRR4 150 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 LILRA3Q8N6C8 439 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 ELMO1Q92556 727 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 MUS81Q96NY9 551 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 TCF25Q9BQ70 676 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 PAIP1Q9H074 479 aaKnown RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 SMURF2Q9HAU4 748 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 SERHLQ9NQF3 203 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 GPRC5BQ9NZH0 403 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 RSL24D1Q9UHA3 163 aaKnown RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 KCNE1BA0A087WTH5 132 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 NOBOXO60393 691 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 SH3BGRLO75368 114 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 MYCLP1P12525 358 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 HALP42357 657 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 ARSFP54793 590 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 ABRQ12979 859 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 PLPP4Q5VZY2 271 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 BORAQ6PGQ7 559 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 CLEC4FQ8N1N0 589 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 GLB1L3Q8NCI6 653 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 IRF7Q92985 503 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 FAM162AQ96A26 154 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 APOLD1Q96LR9 279 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 ZNF641Q96N77 438 aaPredicted RBP17.1■□□□□ 0.33
ERBB2-205ENST00000578199 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 WNT6Q9Y6F9 365 aa17.1■□□□□ 0.33
ERBB2-205ENST00000578199 CXCR6O00574 342 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 SGTAO43765 313 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 TULP3O75386 442 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 MOSPD3O75425 235 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 ADH1AP07327 375 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 ELK4P28324 431 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 SLC6A12P48065 614 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 TUBA4AP68366 448 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 ADARB1P78563 741 aaKnown RBP17.09■□□□□ 0.33
ERBB2-205ENST00000578199 CTBSQ01459 385 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 CBX2Q14781 532 aaPredicted RBP17.09■□□□□ 0.33
ERBB2-205ENST00000578199 KCTD21Q4G0X4 260 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 ABRAXAS1Q6UWZ7 409 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 PATL1Q86TB9 770 aaKnown RBP17.09■□□□□ 0.33
ERBB2-205ENST00000578199 NETO1Q8TDF5 533 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 NCLNQ969V3 563 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 HIC2Q96JB3 615 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 SLC29A3Q9BZD2 475 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 FAM83DQ9H4H8 585 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 GORASP2Q9H8Y8 452 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 FADS2P1A8MWK0 482 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 NUAK1O60285 661 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 DEAF1O75398 565 aaPredicted RBP17.09■□□□□ 0.33
ERBB2-205ENST00000578199 BMP10O95393 424 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 CST1P01037 141 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 ASLP04424 464 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 SDC1P18827 310 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 SLC14A1Q13336 389 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 GBX1Q14549 363 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 CCSMST1Q4G0I0 132 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 NECAB2Q7Z6G3 386 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 CHCHD4Q8N4Q1 142 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 ZSWIM3Q96MP5 696 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 RIOK2Q9BVS4 552 aaKnown RBP17.09■□□□□ 0.33
ERBB2-205ENST00000578199 KAT8Q9H7Z6 458 aaKnown RBP17.09■□□□□ 0.33
ERBB2-205ENST00000578199 TDP1Q9NUW8 608 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 IRAK4Q9NWZ3 460 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 SNX6Q9UNH7 406 aa17.09■□□□□ 0.33
ERBB2-205ENST00000578199 A0A087WXM4 84 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 TRMUO75648 421 aaKnown RBP17.08■□□□□ 0.33
ERBB2-205ENST00000578199 C8GP07360 202 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 CTSLP07711 333 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 PRKACGP22612 351 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 S100A3P33764 101 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 PFN3P60673 137 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 CHIT1Q13231 466 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 LRRC70Q7Z2Q7 622 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 SLC47A1Q96FL8 570 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 PCDH12Q9NPG4 1184 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 SPHK2Q9NRA0 654 aa17.08■□□□□ 0.33
ERBB2-205ENST00000578199 PKD2L2Q9NZM6 624 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms