RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PSTPIP1O43586 416 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 AKR1B10O60218 316 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
COPS3-214ENST00000577246 RPN2P04844 631 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 GYPCP04921 128 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 CTSBP07858 339 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 UQCRHP07919 91 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 ACPPP15309 386 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 SSTR2P30874 369 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 GCGRP47871 477 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 TDGF1P3P51864 188 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 FAM214AQ32MH5 1076 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 KRTAP21-3Q3LHN1 58 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 XKRXQ6PP77 449 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 NLRP9Q7RTR0 991 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 TAS2R42Q7RTR8 314 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 SERPINA9Q86WD7 417 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 FLVCR1-AS1Q8TAF5 88 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 CCDC120Q96HB5 630 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 CRB3Q9BUF7 120 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 SOX17Q9H6I2 414 aaPredicted RBP12.81□□□□□ -0.36
COPS3-214ENST00000577246 ZNHIT6Q9NWK9 470 aaKnown RBP12.81□□□□□ -0.36
COPS3-214ENST00000577246 ITGB1BP2Q9UKP3 347 aa12.81□□□□□ -0.36
COPS3-214ENST00000577246 PCM1Q15154 2024 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 H7C0S8 307 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CAPN3P20807 821 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 MAGP20916 626 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 ACADLP28330 430 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 ADRA1AP35348 466 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 NSG1P42857 185 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CA7P43166 264 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 TNFSF10P50591 281 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 RAB28P51157 221 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 AP2B1P63010 937 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 OCA2Q04671 838 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CACNG1Q06432 222 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 SHISA6Q6ZSJ9 500 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CLDN19Q8N6F1 224 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CATSPER1Q8NEC5 780 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 DNAJB8Q8NHS0 232 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 SUN3Q8TAQ9 357 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 ELMO1Q92556 727 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 HAS2Q92819 552 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 APOL2Q9BQE5 337 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 ZNF160Q9HCG1 818 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 SMARCAL1Q9NZC9 954 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.8□□□□□ -0.36
COPS3-214ENST00000577246 ABI3Q9P2A4 366 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 SEC14L3Q9UDX4 400 aa12.8□□□□□ -0.36
COPS3-214ENST00000577246 MRPS2Q9Y399 296 aaKnown RBP12.8□□□□□ -0.36
COPS3-214ENST00000577246 CSMD2Q7Z408 3487 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 NSG1A0A0A6YYJ2 146 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 VSTM2BA6NLU5 285 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 H7C0C1 242 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 ZNF189O75820 626 aaPredicted RBP12.79□□□□□ -0.36
COPS3-214ENST00000577246 KLHL18O94889 574 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 UNC5CO95185 931 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 ZRANB2O95218 330 aaKnown RBP eCLIP12.79□□□□□ -0.36
COPS3-214ENST00000577246 FKBP9O95302 570 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 S1PR4O95977 384 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 TPM3P06753 285 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 SNRPB2P08579 225 aaKnown RBP12.79□□□□□ -0.36
COPS3-214ENST00000577246 AGAP20933 346 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 COMTP21964 271 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 ATP5OP48047 213 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 SMSP52788 366 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 ITIH4Q14624 930 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 CCDC181Q5TID7 509 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 PRMT9Q6P2P2 845 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 COX15Q7KZN9 410 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 CCDC50Q8IVM0 306 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 MIEF2Q96C03 454 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 HAUS1Q96CS2 278 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 ALS2CR12Q96Q35 445 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 TRIM8Q9BZR9 551 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.79□□□□□ -0.36
COPS3-214ENST00000577246 ENAMQ9NRM1 1142 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 ZNF282Q9UDV7 671 aaPredicted RBP12.79□□□□□ -0.36
COPS3-214ENST00000577246 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.79□□□□□ -0.36
COPS3-214ENST00000577246 FAM169AQ9Y6X4 670 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 SPTBP11277 2137 aa12.79□□□□□ -0.36
COPS3-214ENST00000577246 DIDO1Q9BTC0 2240 aaKnown RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 hCG_1818297A0A087WSY0 165 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 SRPX2O60687 465 aaPredicted RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 RASAL1O95294 804 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 OR56A5P0C7T3 313 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 CXCR2P25025 360 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 RBL1P28749 1068 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 PKLRP30613 574 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 Q0VFX4 171 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 IQCB1Q15051 598 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 BRD3Q15059 726 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 ASTE1Q2TB18 679 aaPredicted RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 CNSTQ6PJW8 725 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 PACS1Q6VY07 963 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 RIPOR1Q6ZS17 1223 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 NDUFAF7Q7L592 441 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms