RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 RPA4Q13156 261 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 ODF2Q5BJF6 829 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 ZNF449Q6P9G9 518 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 RANBP10Q6VN20 620 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 BZW1Q7L1Q6 419 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 SERPINA9Q86WD7 417 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 PRSS58Q8IYP2 241 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 BRIX1Q8TDN6 353 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 HEXDCQ8WVB3 486 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 DLG3Q92796 817 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 FKBP10Q96AY3 582 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 ULK4Q96C45 1275 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 HAUS1Q96CS2 278 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 ZNF469Q96JG9 3925 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 GORASP1Q9BQQ3 440 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 SLC26A1Q9H2B4 701 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 WDR54Q9H977 334 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 SEMA3GQ9NS98 782 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 CUTCQ9NTM9 273 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 SEC14L3Q9UDX4 400 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 CAPN11Q9UMQ6 739 aa9.69□□□□□ -0.86
NPLOC4-220ENST00000576940 TRAV17A0A0B4J275 112 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 DYTNA2CJ06 578 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 VSTM2BA6NLU5 285 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 DSCR3O14972 297 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 MED26O95402 600 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 CELA2AP08217 269 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 ITGALP20701 1170 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 ADRA1AP35348 466 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 CDKN2BP42772 138 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 KLC1Q07866 573 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 XKRXQ6PP77 449 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 SPNS3Q6ZMD2 512 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 ARHGEF18Q6ZSZ5 1173 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 TAS2R42Q7RTR8 314 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 LAPTM4BQ86VI4 370 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 KBTBD2Q8IY47 623 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 TBC1D21Q8IYX1 336 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 SIRT6Q8N6T7 355 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 HAS2Q92819 552 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 POM121Q96HA1 1249 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 VAT1Q99536 393 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 BPIFA3Q9BQP9 254 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 CRB3Q9BUF7 120 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 NAT10Q9H0A0 1025 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 MRM3Q9HC36 420 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 OR6C2Q9NZP2 312 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 STOX2Q9P2F5 926 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 CIDEBQ9UHD4 219 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 POLG2Q9UHN1 485 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 LCMT1Q9UIC8 334 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 DNHD1Q96M86 4753 aa9.68□□□□□ -0.86
NPLOC4-220ENST00000576940 IGLV3-16A0A075B6K0 115 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 KCNN4O15554 427 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 RASAL1O95294 804 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 CRTAMO95727 393 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 HPP00738 406 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 TMEM253P0C7T8 217 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 ESRRAP11474 423 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 ACRV1P26436 265 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 RBL1P28749 1068 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 SSTR2P30874 369 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 SOX11P35716 441 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 ZNF140P52738 457 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 GEMP55040 296 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 FANCCQ00597 558 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 TFDP2Q14188 446 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 SPARCL1Q14515 664 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 KIR2DS3Q14952 304 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 C3AR1Q16581 482 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 TAZQ16635 292 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 SKOR2Q2VWA4 1001 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 GPR33Q49SQ1 333 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 ATG9BQ674R7 924 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 RPTNQ6XPR3 784 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 TAX1BP1Q86VP1 789 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 LINC01555Q8NAE3 123 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 OR5K2Q8NHB8 316 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 CCDC110Q8TBZ0 833 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 STT3BQ8TCJ2 826 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 ADAMTS18Q8TE60 1221 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 DENND1AQ8TEH3 1009 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 ELMO1Q92556 727 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 P3H4Q92791 437 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 MTFMTQ96DP5 389 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 DNAJC1Q96KC8 554 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 VPS37BQ9H9H4 285 aa9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 DDX56Q9NY93 547 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 LUC7L2Q9Y383 392 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-220ENST00000576940 NSG1A0A0A6YYJ2 146 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 TRBV5-4A0A0C4DH59 114 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 SLC5A10A0PJK1 596 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 MAP2K7O14733 419 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 LIN7AO14910 233 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 ANXA9O76027 345 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 AP2A1O95782 977 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 WDPCPO95876 746 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms