RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 GALNT3Q14435 633 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 PTPRCAPQ14761 206 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 OASLQ15646 514 aaKnown RBP5.65□□□□□ -1.5
VPS53-219ENST00000576019 TBC1D25Q3MII6 688 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 AARDQ4LEZ3 155 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 SYTL3Q4VX76 610 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 SYCE2Q6PIF2 218 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 ZNF474Q6S9Z5 364 aaPredicted RBP5.65□□□□□ -1.5
VPS53-219ENST00000576019 TMEM110Q86TL2 294 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 CCDC25Q86WR0 208 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 CCDC83Q8IWF9 413 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 LINC01356Q8N9X3 169 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 CPEB3Q8NE35 698 aaKnown RBP5.65□□□□□ -1.5
VPS53-219ENST00000576019 GMCL1P1Q8NEA9 526 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 OR52N4Q8NGI2 321 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 OR52E1Q8NGJ3 308 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 CAGE1Q8TC20 777 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 BICD2Q8TD16 824 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 TAS1R2Q8TE23 839 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
VPS53-219ENST00000576019 RFKQ969G6 155 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 HARBI1Q96MB7 349 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 DDOQ99489 341 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 OLFM1Q99784 485 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 ADAM2Q99965 735 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 P2RY12Q9H244 342 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 PRORYQ9H606 182 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 GPR108Q9NPR9 543 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 AKIP1Q9NQ31 210 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 SLC35D1Q9NTN3 355 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 TNFSF13BQ9Y275 285 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 STRAPQ9Y3F4 350 aaKnown RBP5.65□□□□□ -1.5
VPS53-219ENST00000576019 A3GALT2U3KPV4 340 aa5.65□□□□□ -1.5
VPS53-219ENST00000576019 CPED1A4D0V7 1026 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 MCF2LO15068 1137 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 TTI1O43156 1089 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 KLK8O60259 260 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 DAB1O75553 588 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 AKR7A3O95154 331 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 NDUFA10O95299 355 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 MOCS3O95396 460 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 TGFAP01135 160 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CXCL10P02778 98 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 NPSP0C0P6 89 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 ZNF806P0C7X5 589 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 EBLN1P0CF75 366 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CCDC192P0DO97 292 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 TCF4P15884 667 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 SRD5A1P18405 259 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CSRP1P21291 193 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 SERPINB6P35237 376 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 WNT5AP41221 380 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 PRCPP42785 496 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 PLCD1P51178 756 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CTSWP56202 376 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 HHEXQ03014 270 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 SPOCK1Q08629 439 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 INAQ16352 499 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 MLANAQ16655 118 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 KRT24Q2M2I5 525 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 PLK5Q496M5 336 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 LBHQ53QV2 105 aaPredicted RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 SGO1Q5FBB7 561 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 RNASEH2BQ5TBB1 312 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 PRAMEF8Q5VWM4 474 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 SLC25A24Q6NUK1 477 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CDC42EP5Q6NZY7 148 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 VWA1Q6PCB0 445 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 TMEM184AQ6ZMB5 413 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 DCDC5Q6ZRR9 648 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 C1orf186Q6ZWK4 172 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 DPPA4Q7L190 304 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 DET1Q7L5Y6 550 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CAMK1DQ8IU85 385 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 SERPINA12Q8IW75 414 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 FBXW8Q8N3Y1 598 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 PAQR4Q8N4S7 273 aaPredicted RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 DENND6BQ8NEG7 585 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 RNASE8Q8TDE3 154 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 FBXL8Q96CD0 374 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 MSI2Q96DH6 328 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 PBKQ96KB5 322 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CNDP1Q96KN2 507 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 NECTIN4Q96NY8 510 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 TXN2Q99757 166 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 WDR83Q9BRX9 315 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 FSD1LQ9BXM9 530 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 MOV10L1Q9BXT6 1211 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 CIPCQ9C0C6 399 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 ZNF304Q9HCX3 659 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CHMP1AQ9HD42 196 aaPredicted RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 DDX4Q9NQI0 724 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 PRMT8Q9NR22 394 aaPredicted RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 COMMD8Q9NX08 183 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 ADAMTS5Q9UNA0 930 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 SLC30A1Q9Y6M5 507 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 CLSPNQ9HAW4 1339 aa5.64□□□□□ -1.51
VPS53-219ENST00000576019 ZNFX1Q9P2E3 1918 aaKnown RBP5.64□□□□□ -1.51
VPS53-219ENST00000576019 A0A0U1RQF3 1178 aa5.63□□□□□ -1.51
VPS53-219ENST00000576019 C5orf52A6NGY3 159 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms