RNA–Protein interactions for RNA: ENST00000575207.5

VPS53-218, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-218ENST00000575207 LOC102723996A0A087X1L8 192 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 A0A0G2JK05 382 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 A0A0G2JNJ9 132 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 MGAT4DA6NG13 374 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 MT-CYBP00156 380 aaPredicted RBP15.38■□□□□ 0.05
VPS53-218ENST00000575207 SLC35G4P0C7Q5 338 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 EPXP11678 715 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 GSCP56915 257 aaPredicted RBP15.38■□□□□ 0.05
VPS53-218ENST00000575207 FANCCQ00597 558 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 OCA2Q04671 838 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 GSE1Q14687 1217 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 FILIP1LQ4L180 1135 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 ATP13A5Q4VNC0 1218 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 GPRC6AQ5T6X5 926 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 SLC25A25Q6KCM7 469 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 H3F3CQ6NXT2 135 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 TMEM220Q6QAJ8 160 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 KDELC1Q6UW63 502 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 PRSS58Q8IYP2 241 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS53-218ENST00000575207 AMER2Q8N7J2 671 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 OR5M3Q8NGP4 307 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 GDAP1Q8TB36 358 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 IMMP1LQ96LU5 166 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 ZNF354BQ96LW1 612 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 CNPY3Q9BT09 278 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 SELENOOQ9BVL4 669 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 ZNF700Q9H0M5 742 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 SIX2Q9NPC8 291 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 ZNF282Q9UDV7 671 aaPredicted RBP15.38■□□□□ 0.05
VPS53-218ENST00000575207 Q9UFV3 132 aa15.38■□□□□ 0.05
VPS53-218ENST00000575207 IGLV3-12A0A075B6K2 115 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 RASGRF2O14827 1237 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 UGT2B7P16662 529 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 UQCRC1P31930 480 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 DSC2Q02487 901 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 DPYSQ14117 519 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 ARHGAP11AQ6P4F7 1023 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 LAPTM4BQ86VI4 370 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 OR52E1Q8NGJ3 308 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 PIGTQ969N2 578 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 OR2A14Q96R47 310 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 TTYH2Q9BSA4 534 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 ZCCHC2Q9C0B9 1178 aaKnown RBP15.37■□□□□ 0.05
VPS53-218ENST00000575207 ANKRD10Q9NXR5 420 aa15.37■□□□□ 0.05
VPS53-218ENST00000575207 A0A1W2PPR1 153 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 KLHL33A6NCF5 533 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 RCCD1A6NED2 376 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 OR2AG2A6NM03 316 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 A8MUI8 341 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 PRPSAP2O60256 369 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 NEURL1O76050 574 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 TFEBP19484 476 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 MX2P20592 715 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 UGT1A1P22309 533 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 HCAR3P49019 387 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 EMP2P54851 167 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 KRT85P78386 507 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 PTP4A2Q12974 167 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 CHRFAM7AQ494W8 412 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 KAZNQ674X7 775 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 ATPAF2Q8N5M1 289 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 HORMAD2Q8N7B1 307 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 OR2L2Q8NH16 312 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 SLC30A5Q8TAD4 765 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 FLVCR1-AS1Q8TAF5 88 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 ARRDC2Q8TBH0 407 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 AMBRA1Q9C0C7 1298 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 MAU2Q9Y6X3 613 aa15.36■□□□□ 0.05
VPS53-218ENST00000575207 USF3Q68DE3 2245 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 ZNF407Q9C0G0 2248 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 A0A0J9YY10 115 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 ANKRD62A6NC57 917 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 SIGLEC16A6NMB1 481 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 CLCA1A8K7I4 914 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 SUN1O94901 812 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 HRGP04196 525 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 CYP1A1P04798 512 aaPredicted RBP15.35■□□□□ 0.05
VPS53-218ENST00000575207 FAM157CP0CG43 387 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 GLI4P10075 376 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 TACR1P25103 407 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 PBLDP30039 288 aaPredicted RBP15.35■□□□□ 0.05
VPS53-218ENST00000575207 CHRNA4P43681 627 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 PPP6R3Q5H9R7 873 aaPredicted RBP15.35■□□□□ 0.05
VPS53-218ENST00000575207 KLHL10Q6JEL2 608 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 SARM1Q6SZW1 724 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 METTL27Q8N6F8 245 aaPredicted RBP15.35■□□□□ 0.05
VPS53-218ENST00000575207 POGLUT1Q8NBL1 392 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 TUBB6Q9BUF5 446 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 SHOC2Q9UQ13 582 aa15.35■□□□□ 0.05
VPS53-218ENST00000575207 SCN2AQ99250 2005 aa15.34■□□□□ 0.05
VPS53-218ENST00000575207 MBD3L4A6NDZ8 208 aaPredicted RBP15.34■□□□□ 0.05
VPS53-218ENST00000575207 MBD3L5A6NJ08 208 aaPredicted RBP15.34■□□□□ 0.05
VPS53-218ENST00000575207 TLX2O43763 284 aaPredicted RBP15.34■□□□□ 0.05
VPS53-218ENST00000575207 PRMT3O60678 531 aa15.34■□□□□ 0.05
VPS53-218ENST00000575207 DNAJB6O75190 326 aa15.34■□□□□ 0.05
VPS53-218ENST00000575207 F13A1P00488 732 aa15.34■□□□□ 0.05
VPS53-218ENST00000575207 SLC4A1P02730 911 aa15.34■□□□□ 0.05
VPS53-218ENST00000575207 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms