RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GNGT2O14610 69 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 WNT9AO14904 365 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 AOC2O75106 756 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SERPINA1P01009 418 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 IL7RP16871 459 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 HOXB6P17509 224 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 S100A3P33764 101 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SLC6A12P48065 614 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SEMG2Q02383 582 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 PTSQ03393 145 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 NFATC3Q12968 1075 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 KCNAB2Q13303 367 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 TOP3AQ13472 1001 aaPredicted RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 CTU2Q2VPK5 515 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 TBC1D25Q3MII6 688 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 GTF2IRD2BQ6EKJ0 949 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 HTR3DQ70Z44 454 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 GTF2IRD2Q86UP8 949 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 TCEAL8Q8IYN2 117 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 CHPFQ8IZ52 775 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 EID3Q8N140 333 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 TMEM132CQ8N3T6 1108 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 CPXM2Q8N436 756 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 OR2AP1Q8NGE2 309 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 FIBINQ8TAL6 211 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SELENOMQ8WWX9 145 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 TESCQ96BS2 214 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ECHDC3Q96DC8 303 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 FAM120BQ96EK7 910 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SCRN2Q96FV2 425 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 CMTM7Q96FZ5 175 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 PYURFQ96I23 114 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 REXO5Q96IC2 774 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ITCHQ96J02 903 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 LMLNQ96KR4 655 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 COPS8Q99627 209 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 LHPPQ9H008 270 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ADNPQ9H2P0 1102 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 RMND5AQ9H871 391 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ARL15Q9NXU5 204 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 LSM7Q9UK45 103 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 PPT2Q9UMR5 302 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 FOXD2O60548 495 aaPredicted RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 PFDN1O60925 122 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 NOL3O60936 208 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 C8GP07360 202 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 HTR1AP08908 422 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SRCP12931 536 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 CCNA2P20248 432 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 AOAHP28039 575 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ABHD18Q0P651 414 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 BOP1Q14137 746 aaKnown RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 C16orf72Q14CZ0 275 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 MEP1AQ16819 746 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 PLEKHG6Q3KR16 790 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ATP13A5Q4VNC0 1218 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 MPPE1Q53F39 396 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 MPP7Q5T2T1 576 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 ZNF691Q5VV52 312 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 LRRC66Q68CR7 880 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SPESP1Q6UW49 350 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 Q6ZNX1 250 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 UBE2R2Q712K3 238 aaPredicted RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 FAM9CQ8IZT9 166 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SLC39A11Q8N1S5 342 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 L3MBTL4Q8NA19 623 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SGCDQ92629 289 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 NCLNQ969V3 563 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 PARVBQ9HBI1 364 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 TMEFF2Q9UIK5 374 aaPredicted RBP8.72□□□□□ -1.01
NCBP3-204ENST00000574911 SNX6Q9UNH7 406 aa8.72□□□□□ -1.01
NCBP3-204ENST00000574911 LOC100130705A0A1B0GUX0 176 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 PER2O15055 1255 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 SLC16A6O15403 523 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 NUAK1O60285 661 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 RECQL5O94762 991 aaPredicted RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 OR56A5P0C7T3 313 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 MPC1LP0DKB6 136 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ACPPP15309 386 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 PCSK2P16519 638 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 PFKLP17858 780 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 SDC1P18827 310 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 LHCGRP22888 699 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 TACR1P25103 407 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 CDKN2CP42773 168 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 MAGEA2P43356 314 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 NEK2P51955 445 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 CCL23P55773 120 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ISL1P61371 349 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 CD47Q08722 323 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 TMED1Q13445 227 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ZNF829Q3KNS6 432 aaPredicted RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ZC3H12BQ5HYM0 836 aaKnown RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 NEK5Q6P3R8 708 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 RFLNAQ6ZTI6 216 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 MSANTD1Q6ZTZ1 278 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 DET1Q7L5Y6 550 aa8.71□□□□□ -1.01
NCBP3-204ENST00000574911 ZNF551Q7Z340 670 aaPredicted RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 RBM23Q86U06 439 aaKnown RBP8.71□□□□□ -1.01
NCBP3-204ENST00000574911 HIPK1Q86Z02 1210 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms