RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PTCHD3Q3KNS1 767 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 ANKRD20A4Q4UJ75 823 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 PAPD7Q5XG87 772 aaKnown RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 PTRHD1Q6GMV3 140 aaKnown RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 SYVN1Q86TM6 617 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 PTRH1Q86Y79 214 aaKnown RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 CILP2Q8IUL8 1156 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 SYTL1Q8IYJ3 562 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 C9orf43Q8TAL5 461 aaPredicted RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 MR1Q95460 341 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 GBP5Q96PP8 586 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 SLC30A3Q99726 388 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 SPRTNQ9H040 489 aaPredicted RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 ACTR5Q9H9F9 607 aaPredicted RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 SAMD15Q9P1V8 674 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 FARSAQ9Y285 508 aaKnown RBP16.68■□□□□ 0.26
SMG6-212ENST00000573153 TP53TG5Q9Y2B4 290 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 KLHL20Q9Y2M5 609 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 MED13Q9UHV7 2174 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 RELNP78509 3460 aa16.68■□□□□ 0.26
SMG6-212ENST00000573153 RASGRF2O14827 1237 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 FANCGO15287 622 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 NRP2O60462 931 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 C1orf105O95561 183 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 ESR1P03372 595 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 CBSLP0DN79 551 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 ERGP11308 486 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 MAGP20916 626 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 CD9P21926 228 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 ATP5DP30049 168 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 CBSP35520 551 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 BDKRB1P46663 353 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 EIF3BP55884 814 aaKnown RBP16.67■□□□□ 0.26
SMG6-212ENST00000573153 ITGA1P56199 1179 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 FCRL6Q6DN72 434 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 NEPROQ6NW34 567 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 PRICKLE2Q7Z3G6 844 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 PPIL6Q8IXY8 311 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 ENDOVQ8N8Q3 282 aaKnown RBP16.67■□□□□ 0.26
SMG6-212ENST00000573153 OR2L8Q8NGY9 312 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 GIMAP7Q8NHV1 300 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 TCTN2Q96GX1 697 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 SIGLEC10Q96LC7 697 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 ZNF285Q96NJ3 590 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 EPN3Q9H201 632 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 FANCEQ9HB96 536 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 PLAC1Q9HBJ0 212 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 MLXIPLQ9NP71 852 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 ZNF71Q9NQZ8 489 aaPredicted RBP16.67■□□□□ 0.26
SMG6-212ENST00000573153 SLC22A11Q9NSA0 550 aa16.67■□□□□ 0.26
SMG6-212ENST00000573153 INTS10Q9NVR2 710 aaKnown RBP16.67■□□□□ 0.26
SMG6-212ENST00000573153 MAP3K7O43318 606 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 KLF7O75840 302 aaPredicted RBP16.66■□□□□ 0.26
SMG6-212ENST00000573153 USP1O94782 785 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 MATN4O95460 622 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 S1PR4O95977 384 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 YBX1P67809 324 aaKnown RBP16.66■□□□□ 0.26
SMG6-212ENST00000573153 PTK6Q13882 451 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 DHX34Q14147 1143 aaKnown RBP16.66■□□□□ 0.26
SMG6-212ENST00000573153 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.66■□□□□ 0.26
SMG6-212ENST00000573153 RHBDD2Q6NTF9 364 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 ZNF549Q6P9A3 640 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 OTOAQ7RTW8 1153 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 HOOK3Q86VS8 718 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 LMNTD2Q8IXW0 634 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 HMGCLL1Q8TB92 370 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 NLNQ9BYT8 704 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 SYNPO2LQ9H987 977 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 TLK1Q9UKI8 766 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 TCFL5Q9UL49 500 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 KLK4Q9Y5K2 254 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 MRFAP1Q9Y605 127 aa16.66■□□□□ 0.26
SMG6-212ENST00000573153 E7EQ34 232 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 WISP1O95388 367 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 CYP2A7P20853 494 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 IVDP26440 423 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 PSMB5P28074 263 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 FMO4P31512 558 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 PTGIRP43119 386 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 CLCN7P51798 805 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 FOXL2P58012 376 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 NCF4Q15080 339 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 TCTN3Q6NUS6 607 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 CASC4Q6P4E1 433 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 ATG14Q6ZNE5 492 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 TAX1BP1Q86VP1 789 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 CREG2Q8IUH2 290 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 DENND6AQ8IWF6 608 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 C2orf73Q8N5S3 287 aaPredicted RBP16.65■□□□□ 0.26
SMG6-212ENST00000573153 ZBTB2Q8N680 514 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 CFAP61Q8NHU2 1237 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 ZNF669Q96BR6 464 aaPredicted RBP16.65■□□□□ 0.26
SMG6-212ENST00000573153 RAB11FIP5Q9BXF6 653 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 DDX47Q9H0S4 455 aaKnown RBP16.65■□□□□ 0.26
SMG6-212ENST00000573153 KLHL42Q9P2K6 505 aa16.65■□□□□ 0.26
SMG6-212ENST00000573153 ISM1B1AKI9 464 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 GOLGA8MH3BSY2 632 aa16.64■□□□□ 0.25
SMG6-212ENST00000573153 DNALI1O14645 258 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms