RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PTSQ03393 145 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 NSUN2Q08J23 767 aaKnown RBP eCLIP6.62□□□□□ -1.35
CHD3-213ENST00000571249 CAPRIN1Q14444 709 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 FAM174BQ3ZCQ3 159 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 NKAIN1Q4KMZ8 207 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 ARSJQ5FYB0 599 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 LRRC66Q68CR7 880 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 TMEM211Q6ICI0 200 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 TRNP1Q6NT89 227 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 RAD9BQ6WBX8 426 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 BNIPLQ7Z465 357 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 OOSP2Q86WS3 158 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 LSRQ86X29 649 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 SIAH3Q8IW03 269 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 CARFQ8N187 725 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 LRRC75A-AS1Q8N1F1 130 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 MYO1HQ8N1T3 1032 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 C19orf47Q8N9M1 422 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 OR11G2Q8NGC1 345 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 GPR150Q8NGU9 434 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 CCDC110Q8TBZ0 833 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 BRIX1Q8TDN6 353 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 ZFPM2Q8WW38 1151 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 C16orf45Q96MC5 204 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 KREMEN1Q96MU8 473 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 SMIM14Q96QK8 99 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 TCF12Q99081 682 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 AP1M1Q9BXS5 423 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 HES7Q9BYE0 225 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 OR2AG1Q9H205 316 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 L2HGDHQ9H9P8 463 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 ARNT2Q9HBZ2 717 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 ZNF160Q9HCG1 818 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 FAM207AQ9NSI2 230 aaPredicted RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 DHCR7Q9UBM7 475 aaKnown RBP6.62□□□□□ -1.35
CHD3-213ENST00000571249 WDR37Q9Y2I8 494 aa6.62□□□□□ -1.35
CHD3-213ENST00000571249 DOCK4Q8N1I0 1966 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 FAM170AA1A519 330 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 FADS2P1A8MWK0 482 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 RNF223E7ERA6 249 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 DYNC1I1O14576 645 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 CTIFO43310 598 aaKnown RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 DNAJB6O75190 326 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 USP1O94782 785 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 ALX3O95076 343 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 UQCRHP07919 91 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 CCDC175P0C221 793 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 FAM153BP0C7A2 387 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 RARAP10276 462 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 IL4RP24394 825 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 EPHB2P29323 1055 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 KRT9P35527 623 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 LMAN1P49257 510 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 NUP107P57740 925 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 AP1S1P61966 158 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 ATP11AP98196 1134 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 GCNT1Q02742 428 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 CLCQ05315 142 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 DAZAP2Q15038 168 aaPredicted RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 POU4F3Q15319 338 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 RBBP7Q16576 425 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 ZNF766Q5HY98 468 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 FAM102AQ5T9C2 384 aaPredicted RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 HIBCHQ6NVY1 386 aaPredicted RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 DPY19L2P1Q6NXN4 242 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 WDR59Q6PJI9 974 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 WASH2PQ6VEQ5 465 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 SHISA6Q6ZSJ9 500 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 REC114Q7Z4M0 266 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 CD163Q86VB7 1156 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 ZDHHC17Q8IUH5 632 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 KBTBD2Q8IY47 623 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 GPR135Q8IZ08 494 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 UMODL1-AS1Q8N2C9 162 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 GHDCQ8N2G8 530 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 KIF18AQ8NI77 898 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 LMO3Q8TAP4 145 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 SYN2Q92777 582 aaPredicted RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 SLC35C1Q96A29 364 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 HS3ST6Q96QI5 342 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 MCCC1Q96RQ3 725 aaPredicted RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 SPATA9Q9BWV2 254 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 SLC22A11Q9NSA0 550 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 TRMT1Q9NXH9 659 aaKnown RBP6.61□□□□□ -1.35
CHD3-213ENST00000571249 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
CHD3-213ENST00000571249 GSAPA4D1B5 854 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 GTPBP10A4D1E9 387 aaKnown RBP6.6□□□□□ -1.35
CHD3-213ENST00000571249 OR5H15A6NDH6 313 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 KMOO15229 486 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 TTI1O43156 1089 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 SOCS5O75159 536 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 OR2B3O76000 313 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 HPP00738 406 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 CELA2AP08217 269 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 MSL3P1P0C860 447 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 ST6GAL1P15907 406 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 POLR2CP19387 275 aaPredicted RBP6.6□□□□□ -1.35
CHD3-213ENST00000571249 HALP42357 657 aa6.6□□□□□ -1.35
CHD3-213ENST00000571249 FMO5P49326 533 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms