RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 POLR2DO15514 142 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 PLRG1O43660 514 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 GCNT3O95395 438 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 CLDN14O95500 239 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 CLTAP09496 248 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 LINC00271P0C7V0 271 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 HOXB8P17481 243 aaPredicted RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 DDX5P17844 614 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 PAX3P23760 479 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 STX2P32856 288 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 GGT5P36269 586 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 MAPK9P45984 424 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 OR1G1P47890 313 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 NRIP1P48552 1158 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 DLX5P56178 289 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 BRWD1-AS2P59051 145 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 SNRPFP62306 86 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 ASIC1P78348 528 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 POU5F1Q01860 360 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 GALNT2Q10471 571 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 FOXD4Q12950 439 aaPredicted RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 USP41Q3LFD5 358 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ZNF718Q3SXZ3 478 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ATP13A5Q4VNC0 1218 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 TCEAL5Q5H9L2 206 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 RESP18Q5W5W9 173 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 PLEKHA7Q6IQ23 1121 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 FAM122CQ6P4D5 195 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 DCLRE1AQ6PJP8 1040 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ZNF720Q7Z2F6 126 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 NR2C2APQ86WQ0 139 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 GPR65Q8IYL9 337 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 DAW1Q8N136 415 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 NAGSQ8N159 534 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 SLC39A11Q8N1S5 342 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ZCCHC9Q8N567 271 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 WFIKKN2Q8TEU8 576 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 DNASE2BQ8WZ79 361 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 CASP10Q92851 521 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 DHX58Q96C10 678 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 PKNOX2Q96KN3 472 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ZNF570Q96NI8 536 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 IL17FQ96PD4 163 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ACCSQ96QU6 501 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 HAUS8Q9BT25 410 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 H2AFJQ9BTM1 129 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 RETREG1Q9H6L5 497 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 EBF2Q9HAK2 575 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 POLD4Q9HCU8 107 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 OLFML3Q9NRN5 406 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.97□□□□□ -1.77
NUP88-202ENST00000570937 ZNF224Q9NZL3 707 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 CTNNAL1Q9UBT7 734 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 ICAM5Q9UMF0 924 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 A4GNTQ9UNA3 340 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 LSM4Q9Y4Z0 139 aaKnown RBP3.97□□□□□ -1.77
NUP88-202ENST00000570937 HES2Q9Y543 173 aa3.97□□□□□ -1.77
NUP88-202ENST00000570937 SF3B1O75533 1304 aaKnown RBP eCLIP3.96□□□□□ -1.77
NUP88-202ENST00000570937 WDR81Q562E7 1941 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 LOXHD1Q8IVV2 1947 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SMIM28A0A1B0GU29 152 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 ARHGEF37A1IGU5 675 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 FRMD3A2A2Y4 597 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 TULP2O00295 520 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 OGTO15294 1046 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 BCAT2O15382 392 aaPredicted RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 RFPL2O75678 378 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 B3GAT3O94766 335 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 DDHD2O94830 711 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 KDM4BO94953 1096 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 PIGRP01833 764 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 AFPP02771 609 aaKnown RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 F7P08709 466 aaPredicted RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 HOXB5P09067 269 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 KCNE1P15382 129 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 KCNA5P22460 613 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 NMT1P30419 496 aaKnown RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 PBX3P40426 434 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SYKP43405 635 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SLC11A1P49279 550 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 OSTNP61366 133 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 HYAL1Q12794 435 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 ZNF155Q12901 538 aaPredicted RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 PTP4A2Q12974 167 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 MMEL1Q495T6 779 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SLC9B1Q4ZJI4 515 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 FAM76BQ5HYJ3 339 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 ALKAL1Q6UXT8 129 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 B3GNT6Q6ZMB0 384 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 TMEM184AQ6ZMB5 413 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 CDR2LQ86X02 465 aaPredicted RBP3.96□□□□□ -1.78
NUP88-202ENST00000570937 SFR1Q86XK3 245 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SLC35F3Q8IY50 421 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 APPL2Q8NEU8 664 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 GOLGA5Q8TBA6 731 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 MAGEC3Q8TD91 643 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 SORCS1Q8WY21 1168 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 POMGNT1Q8WZA1 660 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 TANKQ92844 425 aa3.96□□□□□ -1.78
NUP88-202ENST00000570937 DNAJC19Q96DA6 116 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms