RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SPATA13Q96N96 652 aa18.24■□□□□ 0.51
SCARF1-204ENST00000570902 HS3ST3B1Q9Y662 390 aa18.24■□□□□ 0.51
SCARF1-204ENST00000570902 CCDC78A2IDD5 438 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 PRSS44E7EML9 344 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 KCNN4O15554 427 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 ALOX12BO75342 701 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 ZNF189O75820 626 aaPredicted RBP18.23■□□□□ 0.51
SCARF1-204ENST00000570902 TPBGLP0DKB5 382 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 CTNNA2P26232 953 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 COPS2P61201 443 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 ITIH4Q14624 930 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 NKG7Q16617 165 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 RPUSD3Q6P087 351 aaKnown RBP18.23■□□□□ 0.51
SCARF1-204ENST00000570902 KIRREL2Q6UWL6 708 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 MCATQ8IVS2 390 aaKnown RBP18.23■□□□□ 0.51
SCARF1-204ENST00000570902 TMEM151BQ8IW70 566 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 BCORP1Q8N888 145 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 ACTL9Q8TC94 416 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 ALS2CR12Q96Q35 445 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 SPSB2Q99619 263 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 SLX1AQ9BQ83 275 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 UNKQ9C0B0 810 aaKnown RBP18.23■□□□□ 0.51
SCARF1-204ENST00000570902 GOLPH3Q9H4A6 298 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
SCARF1-204ENST00000570902 SEMA3GQ9NS98 782 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 OLAHQ9NV23 265 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 COPG2Q9UBF2 871 aa18.23■□□□□ 0.51
SCARF1-204ENST00000570902 MACROD2A1Z1Q3 448 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 DSCR3O14972 297 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 PRSS56P0CW18 603 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 POU3F2P20265 443 aaPredicted RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 ITGAXP20702 1163 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 MAGP20916 626 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 PEBP1P30086 187 aaKnown RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 MARCKSL1P49006 195 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 RAB28P51157 221 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 ZNF75DP51815 510 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 EIF3EP60228 445 aaKnown RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 OTUD4Q01804 1114 aaKnown RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 SPARCL1Q14515 664 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 BRD3Q15059 726 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 RBBP7Q16576 425 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 DARS2Q6PI48 645 aaKnown RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 ISLR2Q6UXK2 745 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 PACS1Q6VY07 963 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 FJX1Q86VR8 437 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 MCEMP1Q8IX19 187 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 PARP9Q8IXQ6 854 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 PIANPQ8IYJ0 282 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 TC2NQ8N9U0 490 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 CCDC110Q8TBZ0 833 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 STYXQ8WUJ0 223 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 SLC22A18Q96BI1 424 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 CDKN2AIPNLQ96HQ2 116 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 THOC3Q96J01 351 aaKnown RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 LMF1Q96S06 567 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 INTS7Q9NVH2 962 aaKnown RBP18.22■□□□□ 0.51
SCARF1-204ENST00000570902 IL1RAPL1Q9NZN1 696 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 PLAGL1Q9UM63 463 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 EFR3BQ9Y2G0 817 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 ANKRD12Q6UB98 2062 aa18.22■□□□□ 0.51
SCARF1-204ENST00000570902 DIDO1Q9BTC0 2240 aaKnown RBP18.21■□□□□ 0.51
SCARF1-204ENST00000570902 SLC5A10A0PJK1 596 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 BHMG1C9JSJ3 638 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-204ENST00000570902 F8W8V4 182 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 OR56A5P0C7T3 313 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 RBP3P10745 1247 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 MFAP5Q13361 173 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 GRM7Q14831 915 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 DNAJC21Q5F1R6 531 aaKnown RBP18.21■□□□□ 0.51
SCARF1-204ENST00000570902 ZC3H12BQ5HYM0 836 aaKnown RBP18.21■□□□□ 0.51
SCARF1-204ENST00000570902 TCTE1Q5JU00 501 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 C11orf63Q6NUN7 778 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 CUTCQ9NTM9 273 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-204ENST00000570902 PRSS21Q9Y6M0 314 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 OTOGQ6ZRI0 2925 aa18.21■□□□□ 0.51
SCARF1-204ENST00000570902 MDC1Q14676 2089 aaKnown RBP18.2■□□□□ 0.5
SCARF1-204ENST00000570902 JRKO75564 520 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 RPN2P04844 631 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 PKLRP30613 574 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 RIPPLY3P57055 190 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 COX15Q7KZN9 410 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 KLHDC8BQ8IXV7 354 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 TTC29Q8NA56 475 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-204ENST00000570902 OR11G2Q8NGC1 345 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 KRT35Q92764 455 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 RELTQ969Z4 430 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 SOX17Q9H6I2 414 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-204ENST00000570902 ENAMQ9NRM1 1142 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 APCP25054 2843 aa18.2■□□□□ 0.5
SCARF1-204ENST00000570902 PJA2O43164 708 aa18.19■□□□□ 0.5
SCARF1-204ENST00000570902 ANKRD17O75179 2603 aaKnown RBP18.19■□□□□ 0.5
SCARF1-204ENST00000570902 S1PR4O95977 384 aa18.19■□□□□ 0.5
SCARF1-204ENST00000570902 MSNP26038 577 aaKnown RBP18.19■□□□□ 0.5
SCARF1-204ENST00000570902 MAGEA1P43355 309 aa18.19■□□□□ 0.5
SCARF1-204ENST00000570902 CARSP49589 748 aaKnown RBP18.19■□□□□ 0.5
SCARF1-204ENST00000570902 ART3Q13508 389 aa18.19■□□□□ 0.5
SCARF1-204ENST00000570902 POU6F1Q14863 301 aa18.19■□□□□ 0.5
SCARF1-204ENST00000570902 FAM214AQ32MH5 1076 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms