RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RGS14O43566 566 aa15.06■□□□□ 0
SMG6-207ENST00000570756 ERN1O75460 977 aaKnown RBP15.06■□□□□ 0
SMG6-207ENST00000570756 WBP4O75554 376 aaKnown RBP15.06■□□□□ 0
SMG6-207ENST00000570756 EPOP01588 193 aa15.06■□□□□ 0
SMG6-207ENST00000570756 HK3P52790 923 aa15.06■□□□□ 0
SMG6-207ENST00000570756 MFSD10Q14728 455 aa15.06■□□□□ 0
SMG6-207ENST00000570756 LAPTM4AQ15012 233 aa15.06■□□□□ 0
SMG6-207ENST00000570756 CCDC58Q4VC31 144 aa15.06■□□□□ 0
SMG6-207ENST00000570756 SPANXN4Q5MJ08 99 aa15.06■□□□□ 0
SMG6-207ENST00000570756 AFTPHQ6ULP2 937 aa15.06■□□□□ 0
SMG6-207ENST00000570756 C14orf80Q86SX3 495 aa15.06■□□□□ 0
SMG6-207ENST00000570756 NLGN4XQ8N0W4 816 aa15.06■□□□□ 0
SMG6-207ENST00000570756 OR52E6Q96RD3 313 aa15.06■□□□□ 0
SMG6-207ENST00000570756 BARD1Q99728 777 aaKnown RBP15.06■□□□□ 0
SMG6-207ENST00000570756 IL1RAPQ9NPH3 570 aa15.06■□□□□ 0
SMG6-207ENST00000570756 HECAQ9UBI9 543 aaPredicted RBP15.06■□□□□ 0
SMG6-207ENST00000570756 TIMM13Q9Y5L4 95 aaPredicted RBP15.06■□□□□ 0
SMG6-207ENST00000570756 OTOFQ9HC10 1997 aa15.06■□□□□ 0
SMG6-207ENST00000570756 LOC100506127A0A0U1RQW1 187 aa15.06■□□□□ 0
SMG6-207ENST00000570756 M0R082 166 aa15.06■□□□□ 0
SMG6-207ENST00000570756 CAPN5O15484 640 aaPredicted RBP15.06■□□□□ 0
SMG6-207ENST00000570756 CCNDBP1O95273 360 aa15.06■□□□□ 0
SMG6-207ENST00000570756 ZNF682O95780 498 aa15.06■□□□□ 0
SMG6-207ENST00000570756 OTCP00480 354 aa15.06■□□□□ 0
SMG6-207ENST00000570756 HOXD11P31277 338 aaPredicted RBP15.06■□□□□ 0
SMG6-207ENST00000570756 MAGEA11P43364 429 aa15.06■□□□□ 0
SMG6-207ENST00000570756 UGT2B15P54855 530 aa15.06■□□□□ 0
SMG6-207ENST00000570756 VGLL4Q14135 290 aa15.06■□□□□ 0
SMG6-207ENST00000570756 ABRAXAS2Q15018 415 aa15.06■□□□□ 0
SMG6-207ENST00000570756 TAPT1Q6NXT6 567 aa15.06■□□□□ 0
SMG6-207ENST00000570756 ERAP2Q6P179 960 aa15.06■□□□□ 0
SMG6-207ENST00000570756 UTS2BQ765I0 119 aa15.06■□□□□ 0
SMG6-207ENST00000570756 SAPCD2Q86UD0 394 aa15.06■□□□□ 0
SMG6-207ENST00000570756 ATG16L2Q8NAA4 619 aa15.06■□□□□ 0
SMG6-207ENST00000570756 OR4F6Q8NGB9 312 aa15.06■□□□□ 0
SMG6-207ENST00000570756 LINGO1Q96FE5 620 aa15.06■□□□□ 0
SMG6-207ENST00000570756 CEP19Q96LK0 163 aa15.06■□□□□ 0
SMG6-207ENST00000570756 TAS2R9Q9NYW1 312 aa15.06■□□□□ 0
SMG6-207ENST00000570756 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
SMG6-207ENST00000570756 TRBV5-3A0A0A0MS03 114 aa15.05■□□□□ 0
SMG6-207ENST00000570756 ARVCFO00192 962 aa15.05■□□□□ 0
SMG6-207ENST00000570756 PCDHGA12O60330 932 aa15.05■□□□□ 0
SMG6-207ENST00000570756 HAPLN1P10915 354 aaPredicted RBP15.05■□□□□ 0
SMG6-207ENST00000570756 HOXA9P31269 272 aa15.05■□□□□ 0
SMG6-207ENST00000570756 MLLT6P55198 1093 aaPredicted RBP15.05■□□□□ 0
SMG6-207ENST00000570756 RPP38P78345 283 aaKnown RBP15.05■□□□□ 0
SMG6-207ENST00000570756 CREMQ03060 361 aa15.05■□□□□ 0
SMG6-207ENST00000570756 PTPRNQ16849 979 aa15.05■□□□□ 0
SMG6-207ENST00000570756 PRSS36Q5K4E3 855 aa15.05■□□□□ 0
SMG6-207ENST00000570756 UBXN11Q5T124 520 aa15.05■□□□□ 0
SMG6-207ENST00000570756 ZNF517Q6ZMY9 492 aaPredicted RBP15.05■□□□□ 0
SMG6-207ENST00000570756 TMEM132CQ8N3T6 1108 aa15.05■□□□□ 0
SMG6-207ENST00000570756 ARRDC4Q8NCT1 418 aa15.05■□□□□ 0
SMG6-207ENST00000570756 FLCNQ8NFG4 579 aa15.05■□□□□ 0
SMG6-207ENST00000570756 PSMG2Q969U7 264 aa15.05■□□□□ 0
SMG6-207ENST00000570756 C1orf74Q96LT6 269 aa15.05■□□□□ 0
SMG6-207ENST00000570756 SEMA3CQ99985 751 aa15.05■□□□□ 0
SMG6-207ENST00000570756 POLR1EQ9GZS1 481 aaKnown RBP15.05■□□□□ 0
SMG6-207ENST00000570756 MROH8Q9H579 483 aa15.05■□□□□ 0
SMG6-207ENST00000570756 CLMPQ9H6B4 373 aa15.05■□□□□ 0
SMG6-207ENST00000570756 ADPRHL2Q9NX46 363 aa15.05■□□□□ 0
SMG6-207ENST00000570756 ABCG2Q9UNQ0 655 aa15.05■□□□□ 0
SMG6-207ENST00000570756 MAU2Q9Y6X3 613 aa15.05■□□□□ 0
SMG6-207ENST00000570756 PTGESO14684 152 aa15.05■□□□□ -0
SMG6-207ENST00000570756 CELF2O95319 508 aaKnown RBP15.05■□□□□ -0
SMG6-207ENST00000570756 TSPAN12O95859 305 aa15.05■□□□□ -0
SMG6-207ENST00000570756 CNPP09543 421 aaKnown RBP15.05■□□□□ -0
SMG6-207ENST00000570756 TRAPPC2P0DI81 140 aa15.05■□□□□ -0
SMG6-207ENST00000570756 TRAPPC2BP0DI82 140 aa15.05■□□□□ -0
SMG6-207ENST00000570756 RHOQP17081 205 aa15.05■□□□□ -0
SMG6-207ENST00000570756 CA8P35219 290 aa15.05■□□□□ -0
SMG6-207ENST00000570756 OLR1P78380 273 aa15.05■□□□□ -0
SMG6-207ENST00000570756 ABHD18Q0P651 414 aa15.05■□□□□ -0
SMG6-207ENST00000570756 NPRL3Q12980 569 aa15.05■□□□□ -0
SMG6-207ENST00000570756 PCBP2Q15366 365 aaKnown RBP eCLIP15.05■□□□□ -01e-13■■■■■ 44.4
SMG6-207ENST00000570756 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.05■□□□□ -0
SMG6-207ENST00000570756 GOLGA7Q7Z5G4 137 aa15.05■□□□□ -0
SMG6-207ENST00000570756 RAB43Q86YS6 212 aa15.05■□□□□ -0
SMG6-207ENST00000570756 PLPP6Q8IY26 295 aa15.05■□□□□ -0
SMG6-207ENST00000570756 CARNMT1Q8N4J0 409 aa15.05■□□□□ -0
SMG6-207ENST00000570756 ST13P5Q8NFI4 369 aaPredicted RBP15.05■□□□□ -0
SMG6-207ENST00000570756 DNASE1L2Q92874 299 aa15.05■□□□□ -0
SMG6-207ENST00000570756 CPPED1Q9BRF8 314 aaPredicted RBP15.05■□□□□ -0
SMG6-207ENST00000570756 ELP3Q9H9T3 547 aa15.05■□□□□ -0
SMG6-207ENST00000570756 TXNRD2Q9NNW7 524 aa15.05■□□□□ -0
SMG6-207ENST00000570756 NLE1Q9NVX2 485 aaPredicted RBP15.05■□□□□ -0
SMG6-207ENST00000570756 SNX6Q9UNH7 406 aa15.05■□□□□ -0
SMG6-207ENST00000570756 WNT9AO14904 365 aa15.04■□□□□ -0
SMG6-207ENST00000570756 CA12O43570 354 aa15.04■□□□□ -0
SMG6-207ENST00000570756 FABP3P05413 133 aa15.04■□□□□ -0
SMG6-207ENST00000570756 PRSS56P0CW18 603 aa15.04■□□□□ -0
SMG6-207ENST00000570756 TIE1P35590 1138 aa15.04■□□□□ -0
SMG6-207ENST00000570756 PBX3P40426 434 aa15.04■□□□□ -0
SMG6-207ENST00000570756 RACK1P63244 317 aaKnown RBP15.04■□□□□ -0
SMG6-207ENST00000570756 GPR50Q13585 617 aa15.04■□□□□ -0
SMG6-207ENST00000570756 GTF2H2Q13888 395 aa15.04■□□□□ -0
SMG6-207ENST00000570756 GALNT3Q14435 633 aa15.04■□□□□ -0
SMG6-207ENST00000570756 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
SMG6-207ENST00000570756 GTDC1Q4AE62 458 aa15.04■□□□□ -0
SMG6-207ENST00000570756 GTF2H2CQ6P1K8 395 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms