RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TNRC6AQ8NDV7 1962 aaKnown RBP16.46■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FAM237BA0A1B0GVD1 139 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MAGEB16A2A368 324 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ISM1B1AKI9 464 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 C9J4A7 227 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZSCAN9O15535 394 aaPredicted RBP16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 HCRTR1O43613 425 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 KLF7O75840 302 aaPredicted RBP16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 VAPBO95292 243 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MATN4O95460 622 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ONECUT2O95948 504 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PAMP19021 973 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MAGEA3P43357 314 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TTC27Q6P3X3 843 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 OTOAQ7RTW8 1153 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 N4BP2L2Q92802 583 aaPredicted RBP16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZNF285Q96NJ3 590 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TRIM55Q9BYV6 548 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 KLHL25Q9H0H3 589 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 INTS7Q9NVH2 962 aaKnown RBP16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PLAGL1Q9UM63 463 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PADI2Q9Y2J8 665 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 HEATR5BQ9P2D3 2071 aa16.45■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PCSK5Q92824 1860 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FLNCQ14315 2725 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TARM1B6A8C7 271 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 K7EM74 188 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CES2O00748 559 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZIC2O95409 532 aaPredicted RBP16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 C1orf105O95561 183 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 KRT14P02533 472 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MAGP20916 626 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PTGIRP43119 386 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CSE1LP55060 971 aaKnown RBP16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FOXK1P85037 733 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 GPS1Q13098 491 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PTCHD3Q3KNS1 767 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 YOD1Q5VVQ6 348 aaPredicted RBP16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TTC23LQ6PF05 361 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ASB18Q6ZVZ8 466 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MED25Q71SY5 747 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 HPS6Q86YV9 775 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CILP2Q8IUL8 1156 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TMEM102Q8N9M5 508 aaPredicted RBP16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 LMNTD1Q8N9Z9 388 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 GSDMBQ8TAX9 411 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MAGEC3Q8TD91 643 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ACTRT1Q8TDG2 376 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DENND1AQ8TEH3 1009 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZUFSPQ96AP4 578 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NACC2Q96BF6 587 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TRIM4Q9C037 500 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SLC7A5P2Q9GIP4 190 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ING2Q9H160 280 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 INTS10Q9NVR2 710 aaKnown RBP16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 EURLQ9NYK6 297 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SPATA7Q9P0W8 599 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 KLHL42Q9P2K6 505 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NBASA2RRP1 2371 aa16.44■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PGRMC1O00264 195 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TMEM63AO94886 807 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ERGP11308 486 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 COILP38432 576 aaPredicted RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 EIF3BP55884 814 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DCDP81605 110 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SSPNQ14714 243 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DEFB110Q30KQ9 67 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MRPL14Q6P1L8 145 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NEK10Q6ZWH5 1172 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CENPUQ71F23 418 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 RAB43Q86YS6 212 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 REXO1L1PQ8IX06 675 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 LMNTD2Q8IXW0 634 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 RAB42Q8N4Z0 105 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZBTB2Q8N680 514 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DLG3Q92796 817 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 MAGOHBQ96A72 148 aaKnown RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FOPNLQ96NB1 174 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SPRTNQ9H040 489 aaPredicted RBP16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ACSS2Q9NR19 701 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SLC39A10Q9ULF5 831 aa16.43■□□□□ 0.22
MAP1LC3B-208ENST00000570189 SDR42E2A6NKP2 422 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PYCARD-AS1I3L0S3 204 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 AVILO75366 819 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 DNAJB5O75953 348 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 PDGFAP04085 211 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CBSLP0DN79 551 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CBSP35520 551 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CD97P48960 835 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 FNTAP49354 379 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ARSFP54793 590 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 RRADP55042 308 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NAA25Q14CX7 972 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TRIP13Q15645 432 aaPredicted RBP16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CYP2A13Q16696 494 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ZC3H12BQ5HYM0 836 aaKnown RBP16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 TCTE1Q5JU00 501 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 ANKRD22Q5VYY1 191 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 CPZQ66K79 652 aa16.42■□□□□ 0.22
MAP1LC3B-208ENST00000570189 NEPROQ6NW34 567 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms