RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 NANOGP1Q8N7R0 232 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SLC4A11Q8NBS3 891 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 NEXN-AS1Q8NBZ9 246 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 OR2AK2Q8NG84 335 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SETD6Q8TBK2 473 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 TBC1D16Q8TBP0 767 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 WDR20Q8TBZ3 569 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SDR42E1Q8WUS8 393 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZFAND2BQ8WV99 257 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ADAMTS14Q8WXS8 1223 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ARSGQ96EG1 525 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 FAM84BQ96KN1 310 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 C16orf45Q96MC5 204 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZNF558Q96NG5 402 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 CMKLR1Q99788 373 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ABHD6Q9BV23 337 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 SLC25A23Q9BV35 468 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 NOL11Q9H8H0 719 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ANKZF1Q9H8Y5 726 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 PLAC1Q9HBJ0 212 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 NOX4Q9NPH5 578 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 CHCHD3Q9NX63 227 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 AATFQ9NY61 560 aaKnown RBP eCLIP3.62□□□□□ -1.83
UBR1-211ENST00000569971 IL36RNQ9UBH0 155 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 DNAJB9Q9UBS3 223 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 KCNJ14Q9UNX9 436 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZFP37Q9Y6Q3 630 aaPredicted RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ATXN2Q99700 1313 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 ZNF541Q9H0D2 1346 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 MYO5AQ9Y4I1 1855 aaKnown RBP3.62□□□□□ -1.83
UBR1-211ENST00000569971 NHSQ6T4R5 1651 aa3.62□□□□□ -1.83
UBR1-211ENST00000569971 COL24A1Q17RW2 1714 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 COL1A1P02452 1464 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 LAMB1P07942 1786 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 DLEC1Q9Y238 1755 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 TRAV34A0A0B4J273 112 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 A0A1W2PPM1 405 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 RPS10-NUDT3A0A1W2PQS6 291 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 hDV102S1A0JD36 115 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ARHGEF37A1IGU5 675 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 GOLGA6L9A6NEM1 432 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 FAM90A26D6RGX4 464 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PI4K2BG5E9Z4 385 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 VWA5AO00534 786 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SOCS6O14544 535 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 HS3ST1O14792 307 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ANKRD28O15084 1053 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SLC16A5O15375 505 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 POLR2DO15514 142 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 KCNN4O15554 427 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ASAP2O43150 1006 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 NDUFS4O43181 175 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PRAMEF11O60813 436 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PRDM1O75626 825 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 TOMM70O94826 608 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 FGBP02675 491 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 TPM1P09493 284 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 LINGO3P0C6S8 592 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 TOP1P11387 765 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 TNFRSF1BP20333 461 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 HOXC13P31276 330 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 MXI1P50539 228 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 NUDT6P53370 316 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CD81P60033 236 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CCZ1BP86790 482 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CCZ1P86791 482 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 PPATQ06203 517 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 RBPJQ06330 500 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SRSF1Q07955 248 aaKnown RBP eCLIP3.61□□□□□ -1.83
UBR1-211ENST00000569971 TROAPQ12815 778 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 GPS2Q13227 327 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PPIGQ13427 754 aaKnown RBP eCLIP3.61□□□□□ -1.835e-6■□□□□ 11
UBR1-211ENST00000569971 MELKQ14680 651 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PRTGQ2VWP7 1150 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 AMZ1Q400G9 498 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 FILIP1LQ4L180 1135 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 OTUD1Q5VV17 481 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 ZDHHC20Q5W0Z9 365 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 GALNT17Q6IS24 598 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 WDR73Q6P4I2 378 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 FIGLAQ6QHK4 219 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ZNF534Q76KX8 674 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 IRF2BP2Q7Z5L9 587 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 MRPL10Q7Z7H8 261 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 CCAR2Q8N163 923 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 IQUBQ8NA54 791 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SLC38A9Q8NBW4 561 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ACVR1CQ8NER5 493 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ANKRD20A12PQ8NF67 263 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CCDC148Q8NFR7 591 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 UTP15Q8TED0 518 aaKnown RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 CCDC12Q8WUD4 166 aaPredicted RBP3.61□□□□□ -1.83
UBR1-211ENST00000569971 KCNE4Q8WWG9 221 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 OIT3Q8WWZ8 545 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 TAAR8Q969N4 342 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 ERLEC1Q96DZ1 483 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 HMCESQ96FZ2 354 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 SPAG5Q96R06 1193 aa3.61□□□□□ -1.83
UBR1-211ENST00000569971 CTAGE1Q96RT6 745 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms